Oncorhynchus keta (chum salmon): 118378078
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Entry
118378078 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118378078
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118378078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
118378078
NCBI-ProteinID:
XP_052350783
LinkDB
All DBs
Position
34:complement(74857957..74928874)
Genome browser
AA seq
2677 aa
AA seq
DB search
MKPLKRQRGCSPPSTRAKGGKKRGATETPPERDNRNKLRKENQGGQLQTTPPAHLPRKQS
TTSSESSQQEPIRGSETPKKEGPREQVPPRQPEVGGKPGGPNSTPTSSHNNILTIPIPTT
SPSPTSMSSRKTATFKARVPKKKYIAEHYAGSNAPSLTFTPAPMHNSHSNYSSTSSSINI
INSSSTNSNNSSNTISNSSRTNTTINGINSGTNSISNSISNSSVSHSLAPSVSNEERRVA
ASSHSHGPGEQGMTGASIGPNNGSVAPRDRERDPQGGEIEAEGAPNSVRSVSTDTASEHD
LEVNSQPSTSPARAPYQGSLSGADALAKGLKNQRVLARCRWRDRLNGEQGGRERERDGPL
SPMFRAGVVRRVSGGSADIQLQGEEGILCYPFQGGTTHPEGEETSVEFILDAPPPGTASV
AIGTRVCVPFGGGGGRDGGEQGTPQLYREGVLSQVDPHPAVSFPYRVLLCEDLEALENGG
REEEGGMEEKRRRAQAQAVWVSRQSLRLLTPPWELPHPGGSEREREREERERREEMEVER
EVCQLSIGMALGGPMGAGVRLVHSFSPDGVVGGHHYGNTPPHPSSLVTTSVVTITGEGYP
DREIEQEREQERQKQPQTPEDDMEMSRFTMGTQHRHILSKPLLGGHSYPSSQHLVQGLGT
PLGSHLSSLTLPGPEALGMTPPHLPPSKSALVPLDKTPSQIPTPNPGGGSTSSSASSSRS
RTPLSAALQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTK
EMEGAGGGGERDRGRGGGGSSSGTVTPSDLRGFDWDETSRDSSEASSRGDSRPRLVLPSL
LPHDFSRFDFDECEAATMLVSLGSSHSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANF
SPITASSVLPPPRRHRHPSATGGRLSTPGGAERERHTSGVQPSFHTNLTFTVPMSPSKRK
TDVPPPPSSHPHHDYPPKPELEQGDLNPASFPVLSPQTPAHTHAYTPTFSCPRGVSTPTS
RPPSSSAISPPPLLVSPTPPSPPGPCRFHPTSQQALRDSPVIVRNPEVPLAKFTERPLGR
GGSRCPKSLNSVTPQPVSTLQVPVPINAAAGTATNGTVLLQSPTPTLVLVSSAPPSLTSV
TPGYPTLACISISTTPPSSGPPLTNPASPGEGRGRTERTGSFGGEVQQPVACHPSPTALL
PLILPAENLHPTPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASTQSGEG
QQPINHPQAGSLKTESQGGAVLLQEANEGPPSLERRPTTRLTPSTDDLAPEREAERERPD
SETESDVDDPFFPSVLPEPLSVTPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFM
IFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWK
WCNKDRKKSSSDGRGLPGPGGKDIRERSMSETTEPHGVELKGVGPGLLGVSERNPGEGHV
GQLPRPRAFSQSAVHSLERSDRGNTQALAELSQMCGDGGGQFSGRAQTLSRSQRGVSEDM
TSDEERMVICEEEGDDDVIEDPYPASSIDLKCKERVTDSDSDNASGNESDRKRVFAPVIC
SSSSQPTPHGRSVSLSSYPSKRYDEERGGGLSDRRRKRGIEGGGGDGGGVASLSLSLSSS
GHSVISSPGGPVPSALAPLGLSPLLGLGAVRVASTVVTNVVRPVVSTPVPIASKPRDGAA
SSIPHPPDRRSFPSQQAQLLIGSGVGSGGPGYYSSSSPNPIGAGAGPGGLVTSLVFPGHS
QSTVQLISPSPHPSSHHQLPPTAPVSAPTHNHTNGPLPLSLLQPQFLSSSSLASPGGKAI
TQVQYILPTLSASSNPKSPSPQLHNLPNSIFNLPTAPSTHMSIANGKQVGPGSLMGYASS
PAVGVVSPGARVQSQSPVLQGKMLLPMATVRTAPAPAQQYPLVAPPLPVQNGAQAGSKIF
QIAPMPVVQSQLQQGGAGHPGSPFPVTLGTATVLHQGSAPSQTVLLPPPPTRITYVQSTP
GVPSPLPLVSTTTGSSSPQQAQPTPGSAYVPSPLATLGFTAIAPPGQNLVQPLITGQPPL
QPPVQSPTCPSLPSGPASASVGQIITAIYPPTNITMATGVVSMSAVPHNMVYTVSSSSSL
STHILPKHTFAPATPTTHTHIQLQSDRQTDRQVGERPTDRMSHSQSEKVADRPAETQPEL
QAYGQTDRPSLTQAERQTARQAQTFNKSSSLVAPPSGSSLSLRPCSPPLPSHTSTGSAPG
TPKLPQLPVRTPQKIKATVANIPVGSYEGGGRGKEREKNRERERESTGANSRFSFELEHP
GKSASPSQNTHAAEEPPSDRLPEGHGPGDNTDTRSTEASNESGWKDSVPSSPLPPLLGTD
PALPPPQSDKDAPPPKKVKARPPPLKRTFDSVDKVLSEVYFEERFAQLPEFRPEEVLPSP
TLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPVSPKRKSRRRSSCSSEPSTPKSAAKCE
GDVFTFDRPAPPSVCPPPGSGTGTGAEGEDILGELEFDKVPYSSLRRTLDQRRALVMQLF
QEHGFFPSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAVPSETNEASSLPGPSG
AQSGEGTGGGAEPLGEEVDREREGSPEELRDLQESSR
NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactaaagagacagaggggatgctctcccccctccacgcgggccaaagggggg
aagaagagaggggcgacagagacccccccagagagggacaacaggaacaaactcaggaag
gagaaccaaggcggacagcttcaaaccacaccccccgcccacttgccacggaaacaatcc
acaacctcctctgaaagctctcagcaggagccaatcagaggcagcgagaccccaaagaag
gaggggcctagagagcaggtgccgccaaggcaacctgaagttggggggaaaccagggggg
cctaacagcacccccacctcctcccataacaacatcctcaccatccccatccccactacc
agtcccagccctacctccatgtccagtaggaaaacagccaccttcaaggccagagtcccc
aagaagaagtatattgctgaacactatgctggtagcaacgcgcccagcctcaccttcacc
cctgcccccatgcacaacagccacagtaactacagtagtactagcagtagtattaacatc
atcaacagcagtagtactaacagtaataacagtagtaataccattagtaacagtagtagg
accaacactactattaatggtattaacagtggtactaacagcataagtaacagcattagt
aacagctcagtcagccactcgttagcccccagtgtgtccaatgaggagaggagggtagcc
gctagcagccacagccatggcccgggggaacaggggatgacaggggcctccatagggccc
aacaatggcagtgtggccccccgggacagagagagagacccccagggtggggagatcgag
gcagagggggcccctaactcagtacgctccgtatccacggatacagccagcgagcacgat
ctggaggtgaactcccagcccagtaccagccctgctagagccccctaccagggcagtctg
tctggggcggatgccctggccaaaggcctgaagaaccagagagttctagcccgctgtcga
tggagagacagacttaacggagagcaaggtgggagggagagagagagggatggacccctg
tctcctatgttcagggctggggtggtgcggcgggtgagtgggggcagcgctgatatccag
ctgcagggggaggaggggatactctgttacccctttcagggggggaccacacacccggag
ggggaggagacgagcgtggagttcatcctggacgcccctccacccggcacggcgtccgtg
gccatcgggacacgcgtatgtgtgcctttcggagggggaggggggcgagatgggggtgaa
caggggacacctcagctatacagagaaggggtgctgtcccaggtagacccccaccctgcc
gtgtcgttcccctacagggtgctactgtgtgaggatctagaggcgctggagaatggaggg
agggaggaggagggagggatggaggagaagaggaggagggcgcaggcccaggctgtatgg
gtgtccagacagagcctgaggctgctgactcccccctgggaactgcctcacccagggggg
agtgagagggagagagagagggaggagagggagaggagggaggagatggaggtggaaagg
gaggtgtgccagctgagtattgggatggcgctgggtgggccgatgggagcgggggtgagg
ttggtgcatagcttctctccagatggggtggtgggggggcatcactatggaaacaccccc
ccccatccctcctcgttggtaacgaccagcgttgtcaccatcactggagagggttaccct
gacagagagatagaacaagagagggaacaagagagacagaaacagccccaaacaccagag
gatgacatggagatgtctcggttcactatgggtacccagcatcgccacatcctctccaag
cccctcctcggggggcacagctacccctcctcccaacacctggtccagggcctgggcacg
ccactgggctctcacctgtcctccctcaccttgcctggccccgaggccctgggtatgacc
cccccacacctacccccttccaagagtgccctggtccccctggacaagaccccctcccag
atccccacccctaaccctggaggggggtctacctcctcctcagcctcctcctcgcgctcc
cgcacccccctgtcggccgccctgcagaagtacaagaagggggacgtggtgtgcacccct
aacggtatacgcaagaagttcaacggcaagcagtggaggcgcctctgttccagagagggc
tgtatgaaggagtcccagagacgaggctactgctcacgccacctctccatgagaactaaa
gagatggagggagcgggaggagggggagagagggacagggggagaggaggaggggggagc
agttcggggacggtcaccccctcagacctgcgtgggtttgactgggatgagacgtccaga
gacagcagcgaggccagcagtagaggagactcccgccctcggctggtgctgccctccctc
ctaccccatgacttctccaggtttgactttgacgagtgtgaggcagcaaccatgctggtg
tctctgggcagctctcactctgggaccccctccttctccccaatctccaaccagtcccct
ttctcccctgccccttctccctcaccctcccccctcttcggattccgtcccgccaacttc
tcccccatcaccgcctcctccgttcttccccctcctcgcagacacagacaccccagtgcc
acagggggaaggctgagcacccctgggggggcagagagggagaggcatacctcaggggtc
cagccgtccttccacactaacctgaccttcactgtccccatgagccctagcaaacgcaaa
acagacgttccccctcctccctcctcccacccccaccacgactacccccccaaacctgag
ctggagcagggggacctgaaccctgcctcgttccccgtcctctccccccagaccccagca
cacacccacgcttacacacccaccttctcctgtccccgaggggtgagcacaccaaccagc
cggcccccctcctcctccgccatctcccctcctcccctcctggtgtccccaactcccccc
tcccctccaggcccctgccgtttccaccccacatcccagcaggccttgcgggactctcca
gtgatcgtgcggaacccggaggttcctctggccaagttcacagagcgtccgttaggccgt
ggggggagtaggtgtcctaagagtcttaacagcgttactccccagcctgtctccactctc
caagtccctgtacccatcaacgctgctgctggcacggcaaccaacggcaccgtcctcctc
cagagccccacccccaccttggtgctggtgtcatccgccccgccctccctgacctccgtc
acccccggttaccccactttggcttgcatctccatctccaccacgcccccctcttcggga
ccccccctcaccaacccagccagcccaggggaagggcggggtaggacggagaggacaggc
tcgtttgggggggaggttcagcagccagtggcctgtcacccctctcctacagccctgctg
cccctcatactgcctgcagagaacctgcaccccacaccatgcaaagacatcatcatggga
cgccccgggacagtctggaccaacgtggaaccccggtcagttcctgtgtttccctggcat
tcattggtccctttcctggcaccaacccagtcagatgcctctactcagtctggtgagggc
caacaaccaatcaatcacccccaagctggcagtctgaaaacagagtctcaggggggtgca
gtgctgctacaggaggccaacgagggccccccctccctagagagaagacccacaacacgg
ctgactccctccacggacgacctggccccggagagggaggccgaaagagagaggccagac
agtgagactgagagtgatgtggatgacccgttcttccccagtgttcttcctgagcccttg
tctgtgactcctgtgaagagacgcactcagtccctcagcgccctgcctaaagatggggac
aagagcagccctggcaagagggagaaggaccacatcaggcggccgatgaacgcgttcatg
atcttcagtaagcgtcatcgagcgctggtgcaccagaggcaccccaaccaggacaaccgc
acggttagcaagatcctgggcgagtggtggtatgccctggggcccaaagagaagcagaaa
tatcacgacctcgccttccaggtgaaggaggcccactttaaggcccacccagactggaag
tggtgcaacaaagacaggaagaagtctagttctgatggccgagggctcccggggccgggg
ggcaaagatattagagaaaggagcatgtctgagacgaccgagccccatggtgtggagctg
aaaggggtggggcctggcctgctgggtgtgtctgagcggaatccaggggaggggcatgta
ggtcagctaccccgcccccgagccttctcccagagtgccgtgcacagcctggagaggagt
gacaggggcaacacacaggccctggctgaactgtcacagatgtgtggggatggtggtggc
cagttttcggggcgcgcccagaccctgtcccggtctcagaggggggtcagtgaggacatg
accagtgacgaggaacgcatggtcatctgtgaagaggagggagacgacgatgtcatcgag
gacccgtaccctgccagctccatagacctgaagtgtaaggagagagtgacggacagcgac
agtgacaacgcctctgggaacgagagcgatcgcaagcgtgtctttgctccagtgatctgc
tcttcctcctcccagcccaccccccacggacgctccgtctctctctcctcctacccttcc
aaacgctacgacgaggagagaggaggggggctctcagaccgcaggaggaagagaggaata
gagggaggaggtggtgatggaggaggagtggcatccctctctctttccctgtcctcctca
ggccactctgtcatctccagccccggaggcccagttccttctgcccttgccccccttggc
ctgtctcctctcctcgggttgggggctgtcagagtggcctctacagtggtgaccaatgtg
gttcgtccggtcgtgagcacgccagtccccatcgctagtaaaccccgagacggagcagct
tcatccattcctcacccaccagacaggaggtccttcccatcgcagcaagcgcagcttctg
attggatccggagtaggaagcggagggcctgggtactactcctcatcctcacccaatccc
ataggtgcaggggcgggtccaggggggctggtgaccagcttggtgttcccggggcacagc
cagtccaccgtccagctcatcagtccctccccccatccgtcctcccaccaccagctgccc
cccaccgcccctgtctctgcccccacacacaaccacaccaacggccccttgcccctctcc
ctgctccagccccagttcctctcctcatcatctctggcatcccctgggggcaaagccatc
acacaggtccaatacatcctgcccaccctatcagccagttccaatcccaagagcccctcc
cctcaactgcacaacctgccgaacagtatcttcaacctgcccacagctccgtccacccac
atgtccatagccaatgggaagcaggtggggccgggctcgctgatgggatacgcctccagc
ccagccgtgggagtggtcagcccgggagccagagtgcaatcccagtccccagtcctacag
ggcaagatgctgcttcccatggcaacagtgaggacggcacccgcccctgcccaacagtac
cccctcgtggctccacctcttcctgtccagaatggagctcaagcaggaagcaaaatcttc
cagatcgctcccatgcctgttgtccaatcccagctccagcaaggcggggcagggcatcct
gggagcccttttcccgttaccttgggaacggccacagtgttgcaccaaggttctgcccca
tctcagactgtgctgctgccgcccccaccaaccaggatcacctatgtccagtccacgcca
ggagtcccctctcctctgcctctggtctccacaacaacaggctcctcctccccccagcag
gcccagcccacccctggatctgcatatgttccgtcgcccctagcaacgctgggctttaca
gccatagctccccctggacagaacctagtccaacccctcatcacaggtcagcctcccctt
cagcccccagtccagtcccctacctgcccctcccttccctctggcccagcctctgcttca
gtgggacagataatcaccgccatctaccccccaaccaacatcaccatggcaaccggggtg
gtctccatgtcagccgtgccgcacaacatggtgtacacagtctccagctcctccagtctg
tccactcacatcctgcccaaacacacattcgcccctgccacccccaccacacacactcac
atccagctccagtcggacagacaaacagacaggcaagtaggggagagacccacggacaga
atgtctcactctcagtcagagaaagtggcagacagaccagcggagacgcagcctgagcta
caggcgtacggacagacggacaggccatccctcacgcaagcggaaagacagacggcgagg
caagcccagaccttcaataagagcagcagcttagtggctcccccaagtggctcctcattg
tcactgcggccctgcagcccccccctgccttctcacacttccacaggcagtgcaccaggc
acccccaaactcccccagctcccggtgagaacccctcagaaaatcaaagccactgttgcc
aacatcccggtgggcagctacgagggaggaggccgaggaaaggagagggagaagaaccga
gagagggaaagagagagcactggagcaaacagtcgtttttcctttgagctggagcatcct
gggaagtcggcgtccccctcccaaaacacacacgctgctgaggagcccccctctgacaga
ctccctgagggacacggccctggggacaacactgacacacgcagcacagaggccagcaac
gagtccgggtggaaggactccgtcccctcctcacccctgccccctctcttgggtacagac
cctgccctgccacctccccagagcgacaaagacgcccctcctcccaaaaaggtgaaggcc
cgccccccgccactcaaaaggacctttgactctgtggacaaggtgttgtcggaggtgtat
tttgaggagcggtttgctcagctaccagagttcaggccagaggaggtgctgccctccccc
accctgcagagtctggccacctccccccgcgccattctgggcagctaccgccgcaagagg
aagaactccacagacctggactcgtcaacagaggaccccgtgtctcctaagaggaagagt
agacggcgctccagctgcagctcggagcccagcacacccaagagcgccgccaagtgtgag
ggagacgtcttcaccttcgaccgaccagcccccccgtctgtgtgtccccctccagggtcc
gggacagggacaggagctgaaggagaggacatcctgggggagctggagtttgacaaggtg
ccctactcctctctgagacgcaccctggaccagagacgagccctcgtcatgcagctcttc
caggagcatggcttcttcccctcagcccaggccacggcagccttccaggcacgctactca
gacatcttccccaccaaggtgtgtctgcaactgaagatcagggaggtccgacagaagatc
atgcagactgccgtcccctctgagaccaacgaggcttcctcgctccccggaccgtctggc
gcccaatcaggagaagggacaggaggaggggcggagccattgggagaggaggtggatcga
gagagggagggtagtccagaggagctgagggatttgcaggagtcttctagatga
DBGET
integrated database retrieval system
