Oncorhynchus keta (chum salmon): 118378190
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Entry
118378190 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oke01100
Metabolic pathways
Module
oke_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118378190
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118378190
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118378190
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
118378190
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118378190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
118378190
NCBI-ProteinID:
XP_052367606
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MMQQLFYENYEPNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAQLRHRT
VQLHREIVQMCRYGAAEPSREDLQLGMPPSFMRFHPRLREEVLEWEFLTGKYLFSSSDGQ
PPXRGMDSSQHLALDDIIMQVMEMINANAKTRGRVIDFKEIQYGYRRVNPMYGAEYVLDL
LLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFREEEEMDDKALASSINQDSDSLSFLSNSL
KMFVPFKLSSSSQDQKEPKEPKVNILVPLSGRYDIFVRFMTNLERVCLIPNQNVKLLILL
FSTDNNTERVKQVELMREYHIKYPRAEMEIQPVSGSFSRALALEVGSAHFSNDSLLFYCD
VDLLFTTDFLKRCRSNTVLGEQTYFPIIFSQYDPKVVYAGKVPSENHYVFTAKTGLWRHY
GFGIVCVYKGDLVGAGGFDTSIQGWGLEDVDLFNKFVQSGIRLFRSTDPGIIHVHHPVVC
DPNLEPNQYKMCLGSKASSHGSTQQLAELWLEKNDHGFRKVGSSNNESLRTA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagctgttctacgagaactacgagcccaacaagaagggatacatccgcgac
ctccacaatagcaagatccaccgggccatcaccctgcaccccaacaagaacccgccctac
cagtaccgcctgcacagctacatgctcagccgcaagatcgcccagctccgccaccgcacc
gtccagctccaccgtgagatcgtccagatgtgccgctacggggcggccgagcccagccga
gaggacctgcagctgggcatgcctccatccttcatgaggttccaccctcggctccgcgag
gaggtcctggagtgggagttcctgacgggcaagtacctgttctcctcgtctgacggccaa
ccccccngccggggaatggactcctcccagcatctggccctggatgacatcatcatgcag
gtgatggagatgattaacgccaacgccaagacgcggggacgagtgatcgacttcaaggag
atccagtacggctaccggcgggtcaaccccatgtacggggcggagtacgtgctggacctg
ttgctcctctacaagaagcacaaagggaagaccatgacggtgccggtgaggagacatgcc
tacctccagcagaccttcagccagatccagttcagagaggaagaggagatggacgacaag
gctctcgccagcagcatcaaccaggactctgactccctgtccttcctctccaactccctc
aagatgtttgtgcccttcaagctgtccagctctagccaggaccagaaggagccgaaagag
cctaaggtcaacatactggtgccgctatccggacgctacgacatctttgtccgcttcatg
accaatttagaacgggtgtgcctgatccccaaccagaacgtcaagctgctcatcctcctc
ttcagcaccgacaacaacacagagcgggtcaagcaggtggagctgatgagggagtaccac
atcaagtacccccgtgccgagatggagatccagcccgtgtcgggctccttctcccgggcc
ttggctctggaggtgggctcggcccacttctccaacgactcactgctcttctactgcgac
gtggacctgctcttcacaacagacttcctcaagaggtgccggagtaacacggtcctgggg
gagcagacctacttccccatcatcttcagtcagtacgaccccaaggtggtttacgccggt
aaggtgcccagtgagaaccactatgtgttcaccgccaagacgggtctgtggcgtcactac
ggcttcggcatcgtctgtgtttacaagggcgacctggtcggggccgggggcttcgacacc
tccatccaagggtggggtttggaggacgtggacctctttaacaagtttgtccaatcaggg
atccggttgttccggagcacggacccggggatcatacacgttcaccatccagtagtgtgc
gaccccaacctggagcccaaccagtacaagatgtgcctgggctccaaagcctcgtcgcac
ggctcgacacagcagctggctgaactgtggctcgagaagaatgaccacggcttccggaag
gtcgggagctcaaataacgaatccctcaggacagcgtga
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