Oncorhynchus keta (chum salmon): 118378283
Help
Entry
118378283 CDS
T09424
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118378283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118378283
03021 Transcription machinery [BR:
oke03021
]
118378283
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118378283
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
118378283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
118378283
NCBI-ProteinID:
XP_035621151
LinkDB
All DBs
Position
20:complement(8701200..8725010)
Genome browser
AA seq
535 aa
AA seq
DB search
MSKPAEDEKPGADFPGESTDSERNSPDANDQVQPMKTSPFSLSPTLSSIKSKSEAVPEMI
STHVPPPSQQQTPHPHTQLLLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAH
AAHAAHAAAQANQQQQQQQLTKQEQAPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHL
QSPQFLLPQAQGQQGQQGLLSTPNLIPLPQHQQSQGSLLTIPPRLGLQAQRRHGDGLSSL
QRDKSGDGGVTSGASAAPMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGM
AMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSP
MMGFEGMPGRRRKKRTSIETNVRVALERNFILNQKPNSEEILLMGQQLNMEKEVIRVWFC
NRRQKEKRINPCSATPPLHSQPPSMTHKTPCYSPHMVSSQGLHQAATSLSTTVTSPLPSV
TCPLTPCGSAATSSTPSSRTPPPHSTASPAPSTLSTHSLNAGSGCQWWAAAHFQS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccagcagaggatgagaagcctggggcagactttccaggggagagcacagac
tctgagaggaacagtcctgatgccaatgatcaggttcagccaatgaaaacgagtcccttc
agtctttctcctaccttgagcagcatcaagagtaaaagtgaggcagtacctgagatgatc
tccacccatgtgccgcctccttcccagcagcagacgcctcaccctcacacacaactcctg
ttggcagggagtcagctggcagggctggctgccctcttgcctgcgcagcagcagctgttg
cttcagcaggcccaggctcagctcctggccgccgcggtgcagcagtccaatgcggctcac
gctgctcatgccgctcacgcagccgcccaagccaatcagcagcagcagcaacaacagctg
accaaacaggagcaagccccgccccagctcaccctctctcagcctatccagctcaccgcc
caggatatccagcagctgttgcagctgcagcagttagtcctgatgcccggccaccacctg
cagtctcctcagttcctcctgcctcaggcccagggacaacaggggcagcagggtttgctc
tcgacacctaatttaattccgctacctcaacatcagcaaagccaggggagtcttctaact
attccacccaggctgggactgcaagcacagcgtcgccatggtgatggcctctcatcttta
cagagggacaagagcggggacggcggggtgacctccggggcctcggcagcccccatgacc
tcagtgacctctggccctcacggcgaggagcccagtgacctggaggagctggagcagttc
gctcgcaccttcaaacagagacgcatcaaactgggcttcacacagggtgacgtaggcatg
gcgatggggaaactgtatgggaatgacttcagccagaccaccatctctcgcttcgaggcc
ctaaatctgagctttaagaacatgtgcaagctcaagcctctgcttgagaagtggctaaac
gatgcggagaccatggcgatagacagcatgcttcccagcccgaactctctctcctccccc
atgatggggtttgagggcatgccggggcgtcgcaggaagaaacgcaccagcatcgagacc
aacgtccgcgtggccttagagcgcaatttcatcttgaaccagaagcctaactcagaggag
attctcctgatgggccagcagctcaacatggagaaggaggtgattcgggtctggttctgc
aaccggcgccagaaagagaagcgcatcaacccttgcagtgccacccctcccctgcacagc
cagcccccttccatgacgcacaaaaccccctgctacagcccgcacatggtgtccagtcag
gggctgcaccaggctgccaccagcctcagcacaacagtgaccagtccattaccctcggtg
acctgccctctgaccccctgtggctctgcagccaccagctccaccccctcctctaggact
ccgcctccacacagcacagccagccccgctccttccaccctcagtacccacagcctgaac
gctggctctggctgccagtggtgggcagctgcccatttccagtcttga
DBGET
integrated database retrieval system
