Oncorhynchus keta (chum salmon): 118378317 Help Entry 118378317         CDS       T09424                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04140   Autophagy - animal oke04148   Efferocytosis oke05132   Salmonella infection Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     118378317    04148 Efferocytosis     118378317  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     118378317  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118378317 Membrane trafficking [BR:oke04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     118378317 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CNH zf-Vps39_C TPR_Vps41 WD40_like Clathrin UN_NPL4 Vps39_1 Beta-prop_HPS5 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  118378317 NCBI-ProteinID:  XP_052351798 LinkDB All DBs Position 35:4199748..4248357 Genome browser AA seq 855 aa AA seqDB search MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKNNAGTNRFEVTLEKSNK NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKARGATLFACDLQQSPSGE AQLRMCVAVKKKLQLYYWKDREFYELQGDFAAPDIPKSMAWCQNSICVGFKRDYYLIRMD GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKYALNWTDIPIAME HQSPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGPNIVYVASNHFVWRLVPVSI ASQIRQLLQDKQFELALQLANMKDDVEGDKRQQIHHIQNLYAFNLFCQKRFDDSMQVFAK LGTDPTHVIGLYPDLLPADYRKQLHYPNPLPSLSGAELEKAHLALIDYLTQKRSHLVKHP SSQPPPPLMEGIPPSRAPQKPCRSSTPASNATCMYPGYLRRPHSIVMLPAWIPTIKIPLK KLLQIIDTTLLKCYLHPQRTNVAPVLIWCLLTNVSPIFTEDLTEVETLPRDKVLNFLKEG FKELTIPYLEHIVHVWEETEPEFHNVLIQLYLERVQGLMKQYLNSLPEGKTCYYYYNYLE RVQGLMKQYLNSLPEGVPAVAAGKEEGDLGEFRNKLLCFLEVSTSYEPGCLISDFPFDGL LEERALLLGRMGKHEQALFIYVHVLKDTHMAEEYCHRHYDRETDRSQDVYLSLLRMYLSP PDVHCLGPIKMELLEPQANLIAALHVLELHHSKLNTTKAIDLLPANTQIREICVFLESVL EEKAQRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCIITEEKTCRVCKKKIGNSAFARYP NGVVVHYFCCKDQQW NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcttacgaaccggtccctatcctggagaaactgcctctgcagattgactgt cttgctgcttgggaggactggcttctggtcggcactaaaccaggccatctcctgctctac aggataaaaaataatgcaggtaccaacaggtttgaggtaactctggagaagtccaacaag aacttctcaaagaagatccagcagctgtttgttgtgtcacagtacaagatcctcgtcagt ctgttagagaacaacatccatgtccacgacctcttgaccttccagcagattactgtggtc tccaaggccagaggggcaacgctcttcgcctgtgacctgcagcagtccccctcgggagaa gcccagctgaggatgtgtgtcgctgtgaagaagaagcttcagctgtactactggaaggac agggagttctacgagctacagggggactttgctgctccagacatcccgaagtccatggcc tggtgtcagaactccatctgtgtaggcttcaagagagactactacctcatccggatggat gggcgtggctccatcaaggagctcttccccacggggaagcagctggagcccctggtggcc cccctggctgatgggaaggtggcggtgggccaggatgacctcacggtggtgctcaacgag gagggggtctgcactcagaagtatgccctcaactggaccgacatccccatcgcaatggaa caccagtccccctacatcatagctgtcctgcctcgctatgtggagatcaggacctttgaa cccaggctgctggtccagagtgtggagctacagagaccacgattcatcacatcagctggg cccaatatagtgtacgttgccagcaaccattttgtctggcgcctggtgcctgtgtccatc gccagtcagatcagacagttactacaggacaagcagtttgaactggccctgcaactggcg aatatgaaggatgacgtggaaggagataagcgacagcagattcaccacatccagaatctc tatgccttcaatctgttctgtcagaagaggttcgatgactccatgcaggtgttcgctaag ctcggcacagatcccacccatgtgattggtctgtatccagacctgctccccgctgactac cgtaaacagctgcactaccccaaccccctgcccagtctgtctggagcagaactggagaag gctcacctggcgctcatagactacctgacacagaaacgcagtcacctggtgaagcacccc tccagccagccaccccctcccctcatggaagggattcccccatcaagagcacctcagaaa ccctgcagatcatcgacgcccgcctcaaatgctacctgcatgtaccctggatacctcaga cgcccccattccattgtaatgctacctgcatggattcccaccatcaagattccattgaag aaactcctgcagatcatcgacaccacgctgctcaaatgctacctgcatcctcaaaggacc aacgtggcccctgtgttaatctggtgtctcctgaccaacgtgtcccctatcttcactgag gacctgacggaggtagagaccctgcccagagacaaggtcctgaacttcctgaaggagggc tttaaggagctgactatcccctacctggagcacatcgtacacgtctgggaggagacggag ccagagttccataacgtcctcattcagctgtacctggagagggtccaggggctcatgaag cagtacctcaactccctgcctgagggtaagacctgctactactactataactacctggag agggtccaggggctcatgaagcagtacctcaactccctgcctgagggggttcctgcagtg gctgctgggaaggaggagggggacctgggagagtttaggaacaagcttctatgtttcctg gaggtctctaccagctacgagcctggatgtcttatcagtgacttcccctttgacggtctt ctggaggagagggccctgctgctgggtcggatggggaaacacgaacaggccctcttcatc tacgtacacgtcctgaaggatacacacatggcagaggagtactgtcataggcattatgac agagagacggacagaagccaggatgtgtacctgtctctactgcgcatgtacctgtcccct cctgacgtccactgtcttgggccaatcaaaatggagctgttggagccacaggccaatcta attgcagctctacatgtcctggagctgcaccacagcaagctgaatacaactaaggccatc gacctgctgccagccaacactcagatcagagagatctgtgtgttcctggagagtgtcctg gaggaaaaggcccagaggaaacgctttgaccaggtgctcaagagtctgctgcaggccgag ttcctacgggtccaggaggaacgtatcttccatcagcaggtgaagtgtatcatcacagag gaaaagacctgcagggtctgtaagaagaagataggaaacagtgccttcgccaggtatccc aacggtgttgtggttcattacttctgctgtaaggaccagcagtggtaa

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