Oncorhynchus keta (chum salmon): 118378319
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Entry
118378319 CDS
T09424
Name
(RefSeq) neurexin-3b-like isoform X1
KO
K07377
neurexin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118378319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118378319
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118378319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
118378319
NCBI-ProteinID:
XP_052380105
LinkDB
All DBs
Position
8:complement(37771276..38549842)
Genome browser
AA seq
1706 aa
AA seq
DB search
MTPFSLPQCVLLLLSNLLGLCQGLEFRGSEGQWARYRRWDASTRSDLTFQFQTDTSDALI
LYFDDGGYCDFLLLTVTEGKLQLRFSIDCAETTVTADKSVNDSCWHFAMVSRHNLRTVLA
LDGQTKAEDVRPERQFMIVVSDLFLGGIPGDIRTSVITLPMVRELPPFKGDIKDLNYGNK
VPKLINSQKVRLEEMGLCTGNPCENGGSCSVADGEPYCDCSKTGYTGRTCSQAIQRKPGF
SHLKASESAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGKSAD
YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNGWHDIKVTRNLRQVTISVDGILTT
TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLAR
IVDPKMKLQGEVVFKCENVPTLDPINFESPDSYLSLPKWNTKRVGSISFDFRTSEPNGLI
LFTHGKAQDRRDAAGKKNNKVDFFAVELLDGGLYLLLDMGSGTIKVKATQSKVNDGAWHH
VDIQRDGRSGIISVDSRRTPFTASGENEILDLEGDLYLGGLPDNRVGLVLPTELWTAMLN
YGYVGCIRDLFIDGRSKNIRAISESQNTTGIRPTCSKVTGKQCDSNPCKNNGVCKEGWNR
FICDCTGTGFWATTCEREASILSYDGSMYMKVVMPAVMHTEAEDVSLRFMSQRAFGLLMA
ATSRDSADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEILYAGQKLNDNDWHSVRVVRR
GKNFKLTVDEDMSEGQMAGDHTRLEFHNVETGILTEKRFISSSPSSFIGHLQGLKFNGMF
YIDMCKNGDIDFCELNARFGMRSIIADPVTFKSKGSYLGLATLQAYTTMHLFFQFKTTSP
DGFILFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLLKGNNERALNDNQWHNVVITRDAT
NTHTLKVDAKSVTQNINGAKNLDLKGDLFVAGLGPNMYQNLPKLVVSREGFQGCLASVDL
NGRLPDLINDALFRSGQIERGCEVDFTKADLQGPSTTCQEDSCTNMGVCIQQWENFTCDC
TMTSYTGTQCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGFSTTIKDGILVRID
SAPRLGDYIMLHITEGKVGVTFNIGTVDISVKELNTAINDGKYHLVRFTRNGGNATLQVD
NWPINEHFPAGPSDVERYQMGNKKIPFNYKRPVEDWLQEKGRQLTIFNTQAAISIGGNDR
KRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDMPTSRGAARTTTSVPPEMST
TFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDLEECDSGHAGGELVIPILV
EDPIDIPPVSPRSPFIPLPTTLRPVLPTLRPVLTIIETTKASLPMATEAGITCLSDRDSD
ECDDGLDGDGGDYDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKILTTSAYEGGY
KALAPKWEAKDLRPSKASEAGRTTPTPPLPNLGRTVAEASLPSDGTLAKLPAGKMDNREV
IKALQPDIVLLPLPTVSFDLDGTKPRGPLITSPMLRTVPPALPTAPVVRRVPPGASEVIR
ESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGTVVKD
KAPSGGSGAKGSSGKRPKDKDKEYYV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgactccctttagtctccctcagtgtgttcttctgcttctcagtaatctactgggcctg
tgtcagggcctggagttcaggggttctgagggccagtgggcacggtaccgccgctgggat
gccagtaccagaagtgacctcaccttccagttccaaacagacacgtccgacgccctgatc
ctctacttcgacgacggcggctactgtgacttcctgcttctcaccgtaacggaagggaag
ctacagcttcgcttcagcattgattgcgctgagaccacagtcaccgctgacaaatcggtc
aacgacagctgctggcactttgcgatggtcagccgacacaacctcagaacggtcttggcc
ctggacgggcagaccaaggcggaggatgttcgaccagagcgccagttcatgattgtcgtc
agtgacctcttcctcgggggcatacccggagacatcaggacctcggtcatcaccctgcca
atggttagagagctgcctccgttcaaaggagatatcaaagatctgaattacgggaacaag
gttcccaagctgatcaacagtcagaaggtacgtctggaggagatgggtctatgtacaggg
aacccgtgtgagaatggaggctcctgctccgtggctgatggagaaccgtactgcgactgc
tccaaaacgggatatacaggaaggacctgcagccaagccattcagaggaaaccaggcttc
tcacatctgaaggcatctgagtcagcaagagaagagaacgtggcaacgttccgtggttct
gaatacttctgctacgacctgtcccagaaccccatccagtcatccagtgatgagatcaca
ctctccttcaagacgtggcagaggaacggtctcttgctccacacagggaagtctgctgac
tatgtcaacctggccctaaaggacggggcggtgagcctggtcatcaacctgggctccggg
gccttcgaggccattgtggagcccgtcaatgggaagttcaacgataatggctggcacgac
atcaaggtcacacgcaacctcagacaggtgaccatctctgtggatgggatcctcaccaca
acaggctatacccaggaagactacaccatgctggggtctgatgacttcttctacgtgggt
gggagtcctagtacggctgacctacctggttctcctgtcagcaacaacttcatgggatgt
ctgaaagaggtggtctataagaataatgacatccgtctggagctctcccgtctggctcgc
atcgtagaccccaagatgaagctccagggtgaagtggtgtttaagtgtgaaaacgtaccc
accctggacccaatcaactttgagagccctgattcctacctcagcctgcccaagtggaat
accaagagggtcggttccatctccttcgatttcaggacctccgaacccaacggactcatc
ctattcacccatggcaaagcccaggaccgtcgcgatgcggcagggaagaaaaacaacaag
gtggacttctttgctgtggagctgctcgatggagggctgtacctgctgctggacatgggc
tcgggaaccatcaaggtcaaagccacacagagcaaggtcaatgacggagcctggcaccac
gtggacattcagagggacggacgatcaggcatcatctcagtcgacagtcggaggaccccc
ttcacagccagcggagagaatgagatcttagacctggagggagacctctacctgggtggt
ctccctgacaaccgggtaggcctggtgttacctaccgaactgtggacggccatgttgaac
tacggctatgtgggctgcatcagggacctcttcatcgacggacgctccaaaaacatacgg
gccatctccgagtctcagaacaccacaggcatcaggcccacctgtagtaaagtgacaggg
aaacagtgtgacagtaatccctgtaagaacaacggagtctgtaaggaagggtggaaccgc
ttcatctgcgactgcaccgggactgggttctgggccaccacgtgtgagagagaggcgtct
atcctgagctatgacggcagtatgtacatgaaggtggtgatgcctgccgtgatgcacaca
gaggcagaggacgtctccctacgctttatgtcccagcgtgcatttgggctcctcatggcc
gctacctcccgggactctgccgacacgctccgtctggagctggacagcggccgtgtcaaa
ctcacggtcaacctagactgtgtcaggataaactgtaacaccagcaagggaccagagatt
ctatatgcgggacaaaagctcaatgataatgactggcactctgtcagagtggtccgacgc
ggtaaaaacttcaaactgacagtcgatgaagacatgtctgaaggccagatggcaggcgac
cacacccgtctggagttccataatgtggagacaggcattctgacagagaagcgtttcatc
tcgtcctccccctcctctttcattggacacctgcagggcctgaagttcaacggcatgttc
tacattgacatgtgtaagaatggagatattgacttctgtgagctcaacgcccgctttggc
atgcgctccatcattgctgacccggtgaccttcaagtccaagggcagctatttggggctt
gccaccctgcaggcctacaccaccatgcacctgttcttccagttcaagaccacatcgccg
gacggattcatactgttcaacagtggagacgggaacgacttcattgctgtggagctggtc
aaagggtttgtccactatgtgtttgatctgggtaacgggcccagtctactgaaggggaac
aatgagagagctctgaatgacaaccagtggcacaacgtagtcatcactagggacgccacc
aacacacacacactgaaggtggatgccaagtctgtcacacagaacatcaacggagccaag
aacctagacctcaaaggggatctgtttgtggcaggtctggggcccaacatgtatcagaac
cttcctaagctggtggtctctagggagggtttccagggctgtctggcatctgtcgatctc
aacggccgtctacctgacctcatcaacgatgccctgttccgctcaggacagatcgaacgc
ggctgtgaagttgatttcaccaaagccgacctgcaaggacccagcaccacctgtcaggag
gactcctgtaccaacatgggcgtgtgtattcaacagtgggagaactttacctgcgactgc
acaatgacctcttacacagggacacagtgcaacgaccctggtaccacgtatatcttcggt
aagggcgggggtctgatcacgtatacgtggcctaacaacgagaggcccagcacgcgtacc
gaccgtctggctgtgggcttcagcaccaccatcaaggatggaatcctggttcgcatcgac
agcgctccacgactaggggactacatcatgctacacatcacggaaggcaaggtgggcgtg
acgttcaacatcggcacggtggacatcagtgtgaaggagttaaacactgcgatcaatgac
gggaaatatcacctggttcgattcacaaggaatggggggaatgccaccctgcaggtggac
aactggccaatcaacgaacacttccccgcaggaccaagcgacgttgagcgctatcaaatg
ggtaataagaaaatcccattcaattataagaggccggtagaagattggctgcaggagaaa
ggccggcagctcaccatcttcaacacccaggcggccatctctataggtggtaatgaccgt
aaacgtccctaccagggccagctgtctggcctctactacaacggactaaaggtcctcaac
atggccgccgaaggtcacgccaacatcaaggtgaacgggagcgtccgattggtgggtgac
atgcccaccagtaggggcgctgcccgcaccaccacctctgtgccacctgagatgtccacc
accttcatagagaccactacaactctgtcaacgaccaccacgaggaaacagcgctcccca
cccaccattcagacgacagatgacatagtatcgtcggcggagtgctccagcgacgacgag
gatctggaggagtgtgattccggacacgcaggaggggagttagtcatccccatacttgta
gaggatcccatagacatccctcctgtttccccccgttcccccttcatccccctccccaca
accctccgccctgtcctcccaaccctccgccccgtcctcaccattatcgagaccacaaaa
gcgtccctgcccatggccactgaggcggggataacttgcttgtcggaccgagacagcgat
gaatgtgatgatggtcttgatggtgatggtggtgattatgatggcatggtgatttcgggg
tttggctctggcgaagctttcgactctagcctgccccccactgacgatgaagatttttac
accaccttctccctggtaacagataagatcttgaccacgtcggcctacgaaggtggctac
aaagctctcgcgcccaagtgggaggccaaggacttgaggcctagtaaagcctcagaggcg
ggtaggactacacccaccccgcctctacccaacctcgggcgcactgtagcagaggcgtcc
ctcccatcagacggcacgctagccaaactgcccgccgggaaaatggacaaccgcgaagtg
atcaaagccctgcagccggacatagtcctgcttcctctgcccactgtgtccttcgacctg
gatggcaccaagcctcgtgggcccctcatcacctcacccatgctgcgtacggtgcctccc
gcgttacccaccgcaccagtcgtgaggcgggtgcccccgggggcctctgaggtgatacga
gaatccagcagcacaacgggcatggtggttggcatcgtctcggccgcggcactctgcatc
ctcatcctcctctacgccatgtacaagtacaggaacagggacgaaggctcctaccaggtt
gacgagacacggaattacatcagcaactcagcgcagaccaacggcaccgtggtgaaagac
aaagcacccagcgggggcagtggcgccaagggatccagcggcaagagaccgaaagacaag
gacaaagaatactatgtataa
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integrated database retrieval system