Oncorhynchus keta (chum salmon): 118378326
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Entry
118378326 CDS
T09424
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118378326
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118378326
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
Others
118378326
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118378326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
118378326
NCBI-ProteinID:
XP_052371098
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAEIEGEGINSVAPPLVQPPSRNCSGVSPTQGTGSCQTVTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHK
QVVDLIRAGERELMLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAEL
NQERFVVYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVFGESDVMQEFLSDESDENYNGVSDVELRIAMPDKTTVTVRVRKN
CTTDQVYQAVVMTVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFTTEEEILLNDNQLAVSYCFHQAVDDVKRGFIKAEEKSYQLQKLAEQKKMAMY
LSMLRGCEGYNEIIFPHCSCDSRRKGHVVTAISIHHFKLHACTEEGTLENQVIVFEWVEM
QHWDTDEEGMAFCFQYARAEKKPRWVKIFTPYFNYLHECVERVFCELKWRKEVEEEAVDK
DNKNCSKEEYLPAVETQKGWRHLGGEIITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcgagggagagggaattaattcggtggcacctccgttagttcagccaccc
tctcgtaactgctccggtgtcagcccaacgcagggcaccggcagttgccaaacggtgact
accgttacgtcaggcccgcgactggtgcggatagtcaagtctgactcgggatatggcttc
aatgtccggggacaggttagcgaaggaggacaactacggagcatcaacggggaattgtat
gccccgctacagcatgttagtgctgttttaccgggaggtgcagcggacagagccggtatc
tcgaaaggggaccggattctggaagttaatagtgtgaacgtggagggggcgacccataag
caggtggtggatctgatccgtgcgggggagagggagctgatgctggccgtgctgtctgta
cctccccaggaggctgactgtctggaccctggagacgacggctcagcccagtcctgctac
gactacagtgacaaacaggccgtccccatctccgtccccacatacaaacacgctgaactc
aaccaggagaggtttgtggtgtataatgtgtacatggcaggcagacagctgtgctctaag
aggtacagggagtttgctatcctcaaccagaacctgaagagagagtttgccaactacacc
ttccccaaaatacctggcaaatggcctttttccctgtctgaacaacaactagacgctaga
cgcaggggactggaggaatacctggagaaagtgtgttcagtgagggtgtttggggagagt
gatgtcatgcaggagtttctgtctgacgagtctgatgagaactataacggcgtatcagat
gtggagttgaggatagccatgcctgataaaaccaccgtcacagtccgagtccgcaagaac
tgtacaactgaccaggtctaccaggcagtggtcatgacagtagggatggacagcataacg
gccagctactttgctctgtttgaggtcatcaaccactcctttgtgcgtaaactggctcct
aatgagttcccccacaagctgtatgttcagaactacacgtctgctgtccctgggacctgc
ctcaccctgcgcaagtggctcttcaccaccgaggaagagatcctgctcaatgacaaccaa
ctggccgtcagctactgcttccaccaggcggtggatgatgtgaaaaggggatttatcaag
gcagaggagaagtcctaccagctacagaaattagcagaacagaagaagatggccatgtat
ctcagtatgttacggggctgtgaaggctacaatgagatcatcttcccacactgctcctgt
gactcccgacgcaaaggccacgtcgtcacagccatcagcatacaccactttaaactgcac
gcctgcacagaggagggaacgctagagaaccaggtgatcgtgtttgagtgggtggagatg
cagcactgggacactgatgaggagggcatggccttctgcttccagtacgccagggcagag
aagaaacctcgctgggtcaagatctttactccctacttcaactacctgcatgagtgcgtt
gagagagtcttctgtgaactcaagtggaggaaagaggtggaagaggaggctgtggataag
gacaataagaactgcagtaaagaagaatatcttccagctgttgagacacagaagggatgg
aggcacctaggaggagagatcatcacctcataa
DBGET
integrated database retrieval system