Oncorhynchus keta (chum salmon): 118378410
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Entry
118378410 CDS
T09424
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118378410
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118378410
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118378410
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118378410
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118378410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
118378410
NCBI-ProteinID:
XP_035621280
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Position
4:complement(75926176..75934282)
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AA seq
883 aa
AA seq
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MNWAVLLQNVLVTVHLRQILCYGSVRLSVPEEQEAGVRVGSIGSTFPPLYQLLTQFYLRV
DQGTGDVYTTDNRMDREALCPDQLQAEECIVPHDAIVGPEAELVKFMVVVEDINDHAPHF
DNTEIHLSVSEDVAVGASFLLDDQAEDRDMGSNGQLQYHLEGAGGFFSVTVEEEDEVAIF
FLVVRQGLDREKQDLHEMTLVATDCGSTPLSATATLFIKVTDVNDNCPEITLGSTQKVVI
TEDTPRDTVVARVRATDLDLGPNAAITYSLSPKVSERARELFSLNSHTGLISLRGDLRDR
HSDSVSDRGEEVVLKVLASGPHCPPADTQVTVSLLPAPYQENGIKIRFIAEHQNQTIVLQ
ENQPPTVLALLELPGDTTSVRGSSYLSIEGEVPFSLSRQNGKYLLSTSKPLDYEVKSEYH
VSVVMRGDVEEPAAYGFPRREIQVRVVDVNDNAPQFLQSHYLIDIEENNPPGAFLLKVRA
QDADSGQNGQVTYKLDRPSHTAAAIALYRIDQNTGQLTVSVPLDREQQDVHRLTVVARDN
GSPPLESSVMVTITVLDQNDNAPVFITPHFMFFIPENIPLLAQVGKVGVSDIDAGLNGDV
EVRVVNSSGSPFVIDNAQGTLRCMADVDREKQDRYELDLLATDNGRPSPLTSVARVTVFI
EDVNDNQPQVILPSSNLSCLTISTGTTTGTMVTKIYAIDKDSGLNSEITYTIAAREPPGT
STSSHHHSSSPFQLDARSGNVTLAQRLMGKDLGMHHLFIVVTDGGKPAPLHTTVWVNLLV
NDTLEPCHLDTMPRSLPYRLAQTPSETPSEMPVCDRHTQLILLLGLGMMVASLCLFLATV
VLYMKQRKRSRGEQQQRREINEENQIPLRIPERYFLERERGLF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggctgtactccttcagaacgtgctggtcacagtccatctcaggcagatcctg
tgctacggttctgttcggctctcggttccagaggagcaggaggctggggtccgggtcggg
tccatcgggtccacgttcccccccctttaccagctcctgacccagttctacctcagggtg
gaccaggggacaggggatgtctacaccaccgacaacaggatggaccgagaggccctgtgt
cctgaccaactccaggctgaggagtgtatcgtcccacacgacgccatcgtgggccctgag
gcagagctggtgaagttcatggtagtagtagaggacatcaatgaccacgctcctcacttt
gacaacactgagatccatctgagtgtctctgaggatgtggctgtaggggccagtttctta
ttggacgaccaggcagaggacagagacatgggaagtaacggacagctgcagtaccaccta
gagggcgccggtgggtttttcagtgtgacagtagaagaagaagatgaagtggccattttc
tttttggttgtgcgacaaggactagaccgcgagaagcaggatcttcatgagatgactcta
gtggcaacagactgtggttctaccccactaagcgccacagcaacgttattcataaaagtg
actgacgtgaatgacaactgcccagagattaccctgggcagcacccagaaggtggttatt
acagaggacacacccagagacacagtagtagccagggtcagagccacagacctagacctg
ggccccaacgctgccattacctactccctcagccccaaggtctcagaacgggcaagggaa
ctcttcagtctgaacagtcacactggcctgatcagcctgagaggagacctcagagaccgc
cacagtgacagtgttagtgacaggggagaggaggtggtgttgaaagtgttagccagcggc
ccccactgcccccctgcagacactcaggtaaccgtatccctgctccccgctccataccag
gagaatggcataaagatcaggttcatagcagagcatcaaaaccagacgatagtgttgcag
gaaaaccagccccccactgtcttggctttgctagagctaccgggggatactactagtgtt
agaggctcatcgtatctctccattgaaggagaggtgccgttctctttgagccggcagaat
ggcaaatacctcctgtcgacatcaaagcctttagactacgaggtgaagagtgaatatcat
gtttctgtagtgatgcgtggtgatgttgaagagcctgcagcttacggcttccccaggaga
gagatccaggtgagggtggtggatgtgaatgataatgctccacagtttctccagagtcac
tatctgatagacatagaggagaataacccccctggggcgtttctgctgaaagttagggcg
caggatgcagacagcggtcagaacgggcaggtcacttacaaactggatcgaccatcacac
acggcggcagcgatagccctttatagaatcgaccagaacacaggtcagctgacagtttct
gtaccactggacagagaacaacaggatgttcacagattgacagttgtagccagagataac
ggctctcctccattagagtcctctgtgatggtgacgatcaccgtcctggaccagaatgat
aacgctcctgtcttcatcacccctcacttcatgttcttcatccctgagaatatacctctc
ctggcccaggtggggaaggtgggggtgtcagacatagacgcagggcttaacggggatgtg
gaggtgagggtggtgaacagcagtggcagccccttcgtcatagacaacgcccaggggacg
ctgcgctgcatggccgatgtcgaccgcgagaagcaggaccgctacgagttagatctgctc
gccaccgacaacggacgcccgtcacctctgacctccgtcgccagggtaacagtgttcatc
gaggatgtcaacgacaaccagccccaggtcatccttcccagcagcaacctgtcgtgtctc
accatctccactgggaccaccacgggcaccatggtaaccaagatctacgccatcgacaag
gactcagggttaaactcggagatcacatacaccattgcagcgcgggaaccaccgggcacc
tctacatcatcccatcaccacagcagcagtcccttccagctggacgctcggtctggtaac
gtgaccttagcccagaggctcatgggtaaggacctggggatgcaccacctgttcatcgtg
gtgactgacggtgggaaaccagcacccctccacaccaccgtctgggtcaatctgctggtc
aacgacaccttggaaccatgccatctggacaccatgcccagatccctgccctacagactg
gcacagacgccctccgaaaccccctccgagatgcccgtctgcgacagacacactcagttg
atcctgctgctaggcctgggcatgatggtggcctcgctctgtctgtttctggccacggtt
gttttatacatgaaacagaggaagagatctagaggggaacaacagcagaggagggagata
aatgaggagaatcagattcctctacgcattccggagagatatttcttagaacgagagaga
ggcttgttctga
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