Oncorhynchus keta (chum salmon): 118378417
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Entry
118378417 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118378417
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118378417
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118378417
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
118378417
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118378417
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118378417
Prokaryotic type
118378417
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
AsnRS_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
118378417
NCBI-ProteinID:
XP_052314559
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All DBs
Position
12:complement(51606964..51631146)
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AA seq
556 aa
AA seq
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MDMAEKVTKTADELYVSDKEGNDQDGDGTEQKPFKTALRALTFAGKEPFPTIYVDSQKEG
ERWAVISKTQRKNVKKLFAREQMKSDSKDKKEAEDSERREKNLDGAKKVTIENDSSLPEP
KTVKIYQLEPLRGQRVKVFGWVHRMRKQGKNLLFIVLRDGTGFLQCVLNDKLCQCYNALV
LSTESTVALYGTVQEVPKGKQAPGGHELTCDFWELVGLAPPGGADNLLNEESDVDVQLNN
RHMMIRGENVSKILRVRSTVTQCFRDHFFNXGYHEITPPTLVQTQVXGGSTLFNLNYFGE
EAFLTQSSQLYLETCIPALGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTYEDLLS
RLEDLVCDVVDRVLKSPAASLLYQVNPDFKPPKRPFKRINYSDAIIWLKEHDIKKDDGTY
YEFGEDIPEAPERLMTDAIGETILLCRFPAEIKSFYMQRCPEDRRLTESVDVLMPNVGEI
VGGSMRIWDAEELLEGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWLLNRHH
IRDVCLYPRFIQRCRP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcggagaaggtaacgaaaactgcagatgaactgtatgtgtctgacaaagag
ggaaatgaccaggatggcgatggaacagaacagaagcccttcaagaccgcattgagggcg
ttgacatttgctggaaaagaaccattcccaaccatctatgtggactctcagaaggaagga
gagcgttgggcagtgatctccaagacacagaggaaaaatgtgaagaagttatttgctcgg
gagcagatgaagagcgactccaaagacaaaaaggaggcagaggattctgagagacgagag
aagaatctggacggagctaagaaagtcaccattgagaatgactccagccttccagagccc
aaaacggttaaaatctatcagctggagcctctccgggggcagagggtgaaggtgtttggt
tgggtgcaccgaatgagaaaacaaggaaagaacctgctgttcatcgtgctgagagatgga
actggtttcttgcagtgtgttctcaacgataaattgtgtcagtgctacaatgccttggtg
ctgtccactgaaagcacagtggctctgtatgggacagtgcaagaagtacctaaaggaaaa
caggcccctggaggtcatgagctgacctgtgacttctgggagctggtgggtctggcgccg
cctggaggagctgacaacctgctgaatgaggagtctgatgtggacgttcagctcaacaac
agacacatgatgatccgtggggagaacgtgtccaagatcctccgggtccgttccactgtc
acacagtgcttcagggatcacttcttcaacnccggataccatgagatcaccccacccacc
ctggtgcagacccaggtgngaggaggttccaccctgttcaacctgaactactttggggag
gaggcgttcctgacccagtcctcacagctctacctggagacttgtatccctgctctggga
gacaccttctgtatcgctcagtcctaccgcgcagagcagtcccgcacccgcaggcacctg
tccgagtacactcacatagaggcagagtgccccttcatgacctatgaggacctactgagc
aggctggaggatctggtgtgtgatgtggtggacagagtcctgaagtctcctgctgcttct
ctactctaccaagtcaaccctgacttcaagccccccaagaggcccttcaagaggatcaac
tactctgatgccatcatctggctgaaggagcatgacatcaaaaaggatgatgggacctac
tatgagttcggagaggacatccctgaggccccagagaggctgatgactgatgccatcggt
gagaccatcctgctgtgccgcttcccggctgagatcaagtccttctacatgcagcgctgt
cctgaggaccgacgcctcactgagtcggtggatgtgctgatgcctaacgttggagagata
gttggagggtctatgaggatctgggatgctgaggaactgctggagggatacaagagggag
ggcattgacccaaccccttactactggtacactgaccagaggaagtatggtacctgtccc
cacggtggctacgggctcggcctggagaggttcctcacctggctgctgaacagacaccac
atcagagacgtgtgtctctacccccgcttcatccagcgctgtcgaccctaa
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