Oncorhynchus keta (chum salmon): 118378432
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Entry
118378432 CDS
T09424
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118378432
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118378432
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
SALM family
118378432
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118378432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
fn3
LRR_9
Ig_2
LRRCT
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
118378432
NCBI-ProteinID:
XP_052353764
LinkDB
All DBs
Position
35:76733656..76805005
Genome browser
AA seq
1120 aa
AA seq
DB search
MRLSENSLSLPGTKQIKGIVECVTQRPKSASLMCVCRKGVTHTHTHTQTRIHTWGGIRHT
HTWLEDRCDTDRKGLRIILNITMPDPPPHHPTRRRHPSPHTHLHPQRRTEHSILSSVSPS
ITLQNDSERLPQSLPRSFSSHLILCSPETPPNPTLPSHLIRCVCPSPAFPALHWLTLVTC
CCLLPSLIGAGEMWDVVAVCPFHCVCRNLSDSLSTLCADKGLLFVPPNVDRRTVELRLAD
NYITEVGGSDFANMTGLVDLTLSRNTIHSIRPMAFSDLESLRSLHLDGNRLTTLGPRDLV
GMVNLQHLIVNGNQLTRVSAEAFDDFLLTLEDLDISYNNLRRVPWESIQNMASLHTLNLD
HNLIDHIAEGSFGELYKLARLDMTSNRLRTLPPDPLFARSQTGALSPTPYNSVISLNFGG
NPLHCNCELLWLRRLVREDDMETCATPPQLAGRYFWSIPEEEFTCEPPLITRHSHKLWVL
EGQRATLKCRAIGDPEPVIHFVSPGDRIVANSSRATSYRNGTLDLLVTVARDDGAYTCIA
INAAGEATATVDLKIVPLPHRNGNVTVTGNTGNSNGNIPGSSDITTGKSGNSGVNGVNVR
ETEEGKGEEGEGGEEEEEEEEEEEDGGTRVEEGERIVGIQGVTSTSAQVRWDLGRSAGVY
LVWMFQIQYNCTADEALVYRILPSTSNSFMLKNLVSGADYNLCVLAIFDDIVTSLAATKV
LGCAQFSTKELYPECKSLQAHFLGGTLTILVGGIIVVTLLVFTVALMVRHRVCSNHGDQC
DHGDDGDEPACCQGGSLGSPVKGAAAGGGRGVYSQSNGNGDVMMVVLPNGLPSKQRGGRE
KEREKEKGGADVPPNLPPKPKPKAQTLPRPIVTWEGRGEKGRGQGERQLPPYTLEAERDS
AYYAPVVSLSPSTLPRQSRGGTGTGRARLRPDGVVVGGAKRASFALDMPLGQDLLSDWRM
RHGVIVGGVEDKWNSSQAYQSPGAPLSPGSVRAKRSNSLDMGSSSFSPVSIATTTTVAQR
QYSSRRGYAKRLSVTWTRRSKSLHGMLVHCASATSTTSSTTSDEGSINGEFAVVQHGYVH
AYNNTNSNSTSAVIKGNGNEKEKGGKEKTASDEGLEESVV
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgagattgagtgaaaattctctttctctccctggaactaaacaaataaaagggatcgtg
gagtgtgtgactcagcgacccaaatccgcctctttgatgtgtgtgtgtcggaagggagtc
acacacacacacacacacacacaaaccaggatacacacctggggcggaatcaggcacaca
cacacctggttggaggataggtgtgacacagacagaaaaggtctgcggataattctcaat
attaccatgccagaccccccaccccaccaccccacccgaagacgacacccatcaccccac
acacacctacacccacagagaaggacagaacattccatcctctcctccgtctctccttca
atcacacttcagaatgacagtgaaagacttccccaatcccttcctcgatcattctcctcg
catctcattctgtgttccccggaaacccctcccaaccctacccttccctcacatctcatt
cgctgtgtttgcccatctcctgcttttccggccctccattggctgacactggtcacatgc
tgctgcctgttgccctctctgattggtgcaggggagatgtgggacgtggttgcggtgtgt
ccattccactgcgtctgtcggaacctgtcagactctctgagcacgctctgtgcagataaa
ggcctcctattcgttccaccgaatgtcgatcggcgaactgtcgagctccgattggctgat
aactacatcacggaagtaggtgggtcggactttgccaacatgaccggattggttgatttg
actctgtcccggaacactatccactccatccgaccaatggcgttctccgatctcgagagt
ttgcgaagtttgcatttggacggtaaccgcttgacgacgctggggccgagagaccttgtg
ggaatggttaatctacagcacctcattgtcaacggtaaccagctgacgagggtgtcggca
gaagcattcgatgatttcctgctgacgctggaggacctggatatctcatacaacaacctc
cgaagggtcccgtgggagtcgatccagaacatggccagtctacacaccctgaacctggat
cataatctgatagaccacatcgcagagggatcctttggagaactgtacaagctggctcgc
ctggatatgacctccaataggctgaggaccctgccacctgatcccctgtttgcaaggtct
cagacgggagccctcagtcccactccctacaacagcgtcatcagcctgaacttcggaggg
aacccgctacactgtaactgtgagttgctatggttacggcggctggtccgagaggacgac
atggagacgtgcgccacgccccctcagctggccggcaggtatttctggtccatccctgag
gaggagttcacctgtgaaccgcccctcatcaccagacacagccacaagctctgggtcctg
gaaggtcaaagggcaaccttgaaatgcagagccatcggcgaccccgaacccgtcatccat
tttgtctcacccggcgatcggatcgtggcgaactccagccgcgcgacatcgtaccggaac
ggaacattggatctcttagttacggttgctagggacgacggagcgtacacgtgcatagcg
ataaacgcagcgggggaagctaccgcgacggtggatctaaagatcgttccgttgccgcac
cggaacgggaatgtgacggttaccgggaacactgggaattctaacgggaatattccgggt
tcttcagacatcaccaccgggaaaagtgggaattccggagttaatggtgtaaatgtgaga
gaaacagaggaagggaaaggagaagagggagaggggggtgaggaggaggaggaggaggag
gaggaggaggaggacggagggactagggtggaggaaggagagaggattgtagggatacaa
ggagtcacttctacctcagcccaggtgagatgggacctcggccgatcggctggagtttac
ctggtgtggatgtttcagatacagtacaactgcacagccgacgaggcgctggtgtacagg
atcctcccgtctaccagtaacagtttcatgttgaagaacctggtttctggagcagactac
aacctgtgtgtcctggccatctttgatgacatcgtcacctcactggccgcaaccaaggtt
cttggctgcgcccagttcagcactaaagaactctacccagaatgcaaatctctgcaggcc
cacttcctgggtggaaccttgacaatcctggtcggaggcattatagtggtaacactgctg
gtgttcaccgtggcgctgatggtgcgtcaccgtgtatgcagtaaccacggtgaccaatgt
gaccacggggatgatggtgacgagccggcatgttgccagggcgggtcattagggagtccg
gtgaaaggggcggcggccggaggtggcagaggagtctacagccaatcgaatggcaatggg
gatgtgatgatggtggttttgcccaatgggctgccttcgaagcagcgaggtggcagggag
aaggagagagaaaaggagaaaggaggggctgatgtacctcctaatttaccccccaaacca
aaacctaaagcccaaactctgcccaggcctatagtaacctgggagggcaggggagagaag
gggagaggacagggtgagagacaacttcctccatacaccctcgaagcagaacgggactct
gcctactatgctcctgtcgtaagcttgtccccttccacgctcccccgccaatcacgagga
ggaacaggaacggggagggctaggctccgcccagatggagtagtagtgggcggggccaaa
cgggcaagcttcgccctggacatgcccctgggacaggatctcctctctgattggaggatg
agacatggtgtcatagtgggcggggtcgaagacaaatggaattcctcccaagcctatcag
agcccgggagctcccctaagccccggctcagttcgcgccaaacgtagcaactccctcgac
atgggttcttcttctttttctcctgtttccattgccacgacgacaacggttgcccagcga
cagtacagcagtcgccgcggttacgccaagcggctgtcagtcacctggacaaggcgaagt
aaatcgctgcatggaatgttggtacactgcgcctcggcaaccagcaccacttcctcgacg
accagcgacgagggaagcataaacggggagtttgccgtagttcaacatggttacgtccac
gcctacaacaacactaactctaactctacgagtgctgttatcaagggcaatgggaacgag
aaagagaaaggagggaaagagaagacagccagtgatgaagggctggaggagagtgtggtg
tag
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