Oncorhynchus keta (chum salmon): 118378437
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Entry
118378437 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04144
Endocytosis
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118378437
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118378437
09144 Cellular community - eukaryotes
04530 Tight junction
118378437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118378437
04121 Ubiquitin system [BR:
oke04121
]
118378437
03029 Mitochondrial biogenesis [BR:
oke03029
]
118378437
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118378437
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118378437
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
HECT type E3
118378437
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
118378437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Reovirus_L2_N
Motif
Other DBs
NCBI-GeneID:
118378437
NCBI-ProteinID:
XP_035621314
LinkDB
All DBs
Position
14:69870474..69919453
Genome browser
AA seq
905 aa
AA seq
DB search
MSMAALPEVRGLQTDENEARILRVKVIAGIGLAKKDILGASDPYTRVSLYDPVNGELTSL
QTKTIKKTLDPKWNEELFFRVHPRKHRLLLEVFDENRLTRDDFLGQVDVPLHQIPTENPN
IERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQDMS
GPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSHVEAEQRQNIHMEAQ
HAFTARRQISDQEDSNDRQQESTESWEIITEDESTLYNSQRSPPPPHSPXEFHSFCDELS
RLQALGATSGKRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVLLATSVGLPPGWE
EKQDSKSRPYYVNHNSRITTWTRPLIQITSDAAAQAVLSQNATVYQPPMLSPEGSPQHSP
GSQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKIPVHMRRRPSLDPTDLGPM
PPGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKK
PADIPNRFEMKLRRNTVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFL
ISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAF
FIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHEL
KPAGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELEL
LMCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPM
NGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQG
FDGVD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggcggcacttcccgaggtccgtggacttcagactgatgagaatgaggctaga
attctgagagtgaaagtcatagctggaattggtttggccaagaaagatatccttggagcc
agtgatccatatacaagagtgtccctttatgaccctgtcaatggagaactaacaagtctt
cagactaaaacaattaaaaagacattggacccgaagtggaatgaggaattatttttcagg
gttcatcccaggaagcatcggctgttgctggaggtgtttgatgagaatcgtctgacacgt
gatgactttctggggcaggtggatgtaccattacaccagataccgacagaaaatcctaac
attgaaaggccatacacattcaaggattttctacttcacccgagaagtcacaaatccagg
gtcaaaggtcatctccgtctgaagatgacctacctacccaaaaacaactcagaggatgct
gcagaacagactgaagacatggatcctagttgggagtttttagagggccaggacatgtcc
ggtcccaggcacaaccacctgctgcctgcaatgccccctggctgggaggagaggcaggac
aacctgggcaggacctactatgtcaaccacgaaaccaggaccacacagtggcacaggccc
atagtacaagacagccatgtagaggcagagcagaggcagaacatccacatggaggcgcag
cacgccttcaccgcccgcaggcagatctccgaccaagaggactccaacgacagacaacaa
gagtcaactgagagttgggaaatcataacagaggatgagtccacattgtacaacagccag
cgctccccccctccaccccactcccccntggagtttcactccttctgtgacgagctcagt
cgcctccaggccttgggtgccacatccggcaaacgacgtacctccctccagctgcagggc
ccttccagtcattcaagtcactccagtcgcagaggcagtgcccagactctgacagtagag
gagcaccctgttcatcctgtgttgttagcaacctcagtggggctgcctccaggctgggag
gagaagcaggatagtaagagcagaccctactacgtcaatcacaacagcaggataaccact
tggacacggccactcatccagataacctcagacgcagcagcccaggctgttctgtcccag
aacgccactgtgtaccagccccccatgctctctcctgagggctccccccagcactccccc
ggctcacagagggagtgtggcttcatgcctgcaggctgggaggtccgcaatgcccccaac
ggaaaacccttcttcatcgaccacaacactaagaccacttcctgggaagaccccaggttg
aagattcctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatg
ccgcctggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaac
acgaagaacacacaatgggatgaccccagactgcagaattcagccataactggaccagct
gtgccttactccagagactataaacagaagtatgaatacttccggaagaagctgaagaaa
ccggctgacatccccaaccgctttgagatgaagctcaggcggaacaccgtgctagaggac
tcctacagacgtatcctgtcaatcaagagggccgacttcctgaaggcgcggctgtgggtg
gagtttgagggagagaagggcttggattacgggggcgtggccagggagtggttcttccta
atctccaaggagatgttcaacccctattatgggctgtttgagtattctgccacggacaac
tacactctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttc
aagttcattggccgtgtggcaggcatggctgtctaccatggaaagctgctggacgccttc
ttcatcaggcctttctacaagatgatgttgcagaagcccattactctacaggacatggag
tctgtggacagtgagtacttcaactccctgaagtggatattggagaatgacccgatagac
ctggatctgaggttcaccatagacgaagaactctttggacagacacaccagcatgagctg
aagccagcaggatctgaaatagtagtcaccgatgacaacaagaaggaatacatccatctt
gtcatgcagtggaggttcgtgaacaggatactgaagcagatgaccgcattcaaggaggga
ttctatgagttgataccccaggatctcatcaagatctttgacgagaatgagctggagctc
ctgatgtgtggcctgggagacgtggatgtgaacgactggagggagaacaccaagtacaag
aatggctactgtcccaaccagcccgtcatcctgtggttctggaagactgttctgctgatg
gatgcagagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatg
aatggctttgcagagctctatgggtctaacggaccacagctgtttaccattgagcagtgg
ggaacacgagacaaactacctagagcccacacatgcttcaaccggctggatctgcctccc
tatgagtcgtttgaggagctgagggagaagctacacatcgccatagagaatgcacaaggc
tttgatggagtggattag
DBGET
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