Oncorhynchus keta (chum salmon): 118378519
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Entry
118378519 CDS
T09424
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118378519 (rfx1a)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other basic domains
RF-X
118378519 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
VanW
DUF3176
Motif
Other DBs
NCBI-GeneID:
118378519
NCBI-ProteinID:
XP_052373673
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MTTTGYVGELQPVTTQPQGAASGSVTVAGQSSASAAPHTVVAPTQQFLAQLQTTVGAPAA
AAGHTTPPAQATPTAAQKTAVVQVAPTQAPPPQTQYVTAEIQGSSSQANNAQNAPQYIVV
TVTEGSLHSSDSVSDSSPPPAVVQQTGVPTQVVQQVQAAQQRSVVQATSQITAKTEQGIT
TQLSVTNLQPVHLTQEVQQQLQQVPVQHVYTNQVQYVEGGDNNYTTSTIRSGSFTYTDTP
LYTQTTAAPYYEAPPTSGSQVPTTGTPLTVSVTTGSTGGVSMYVAGTGQIVANPAATSGG
GATVVATGGTANGTGEGAGANGSGGSYVIQGGYMLSGNSQGGYSTHNARSSPATVSTTEG
EEGSGVPSADKKVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS
VFMGLRTRRLGTRGNSKYHYYGLRIKACSSLIRLMEDQQHLAMRQQPFSQKQRLKPVQKV
EGMTNGMAAGSGQQQQQQGAGLSDISAQVQQYQQFLDASRTLPEFPDLDLQGKALPEGIE
LEHIKSFQLLYREHCEAILDVTINLQFTLVETLWKTFWRFEESQSGDTGTLAVHDESEKR
LPKDCLVILCKYDPVLRWSRDCDNTLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESW
LTNAMMNIPEEMVRIKVTSASSFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRV
DFANVQEQASWVCRCEDRVVQQLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQASAA
FPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGET
PIAVMGEFASLGRSLNPLDPDKEEEEEEEEESDDECQELSLPSDGAGLGEESLEPPTKLA
RTDQRVLFTTGQD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacaggctacgttggggagttgcagcctgtgacgacccagccccaaggggca
gcgagtgggagtgtgacggtggctggacagtcctcagcatccgctgccccacacaccgtg
gtagctcctacgcagcagttcctggctcagcttcagaccacagtgggggctcctgcagcc
gcagcaggacacaccacaccccctgcacaagccacacccacagctgcacagaagacagca
gttgtccaggtggcgcccacacaggctcctcccccccagacccagtatgtgacggctgag
atccagggttcctcatcacaggccaacaacgcccagaacgccccccagtacatcgtagtc
actgtcacagagggctctctccattcaagtgactctgtgtctgactcgagccctcctcca
gctgtggtacagcagactggggttcccacacaggtggtgcagcaggtgcaagcagcacag
cagaggtcagtggtgcaggcaacgtcccagatcacagccaagactgaacagggtatcacc
acccagctgagtgtcaccaatctgcagcctgtccacctcactcaggaggtgcagcagcag
ctccagcaggtgccagtgcagcatgtgtacaccaatcaggtgcagtatgttgaaggggga
gacaacaactacaccaccagcacaattcgttcaggcagcttcacctacacagacacccct
ctgtacactcagaccaccgccgccccttactacgaagcccctcccacctctggctcacag
gtccccaccaccggcacacccctgaccgtctccgtgacaacgggctccaccggtggtgtg
tctatgtacgtggctggcacaggccagattgtggccaatccggcggccacctctgggggt
ggggcaacggtggtggcgacagggggaacagccaatgggactggggaaggggcgggggct
aatggaagcgggggcagctatgtgatccagggggggtacatgctgagtggcaacagtcag
gggggctactccacccacaacgcccgctcctctcctgccaccgtcagtacaacagagggc
gaggagggtagtggcgtaccgtcggcagacaaaaaggtgcagtggctgctagataactat
gagacagctgaaggggtcagtctgcctcgctccaccctctactgccactacctgctgcac
tgccaggagcagaagctggagcccgtcaacgctgcctcctttgggaagctgatcagatcc
gtgttcatggggctacgcacacgccgcctgggcacccgggggaactccaagtaccactat
tacggcctgaggatcaaggcctgctcctctctgatcagactgatggaggaccagcagcac
ctggccatgagacagcagcccttctctcagaaacagaggttgaagccggtgcagaaggtg
gaggggatgaccaatggcatggcggcaggctcgggccaacagcagcagcagcagggggcg
gggctctctgacatcagcgcccaagtgcagcagtaccagcagttcctggacgcgtctcgg
accctcccagagttccctgaccttgacctgcaggggaaggccctaccggagggcatagaa
ctggagcacatcaagagcttccagctgctgtatcgggaacactgtgaggctattctggac
gtgacgatcaacctgcagttcaccctggtggagaccctgtggaagaccttctggaggttt
gaagagagccagagtggagacactggcacactggctgtacatgatgagtctgagaagcgc
ctgcctaaggactgtctagtgatcctgtgtaagtacgaccctgtgctccgctggagccgc
gactgtgacaacaccctgtaccagggcctggtggagatcctcatccccgatgtgctgcgg
cccatccccagtgccttaactcaagccatccgcaactttgccaagagtctggagagttgg
ttgaccaatgctatgatgaacatcccagaagagatggtccgcattaaggtaacgtcagcc
agttcgtttgcccagacgctgcgcaggtacacctctctgaaccacttggcccaggcagcc
agggctgtgctacagaacacagctcagataaaccagatgctcagcgacctcaaccgcgtg
gacttcgccaatgttcaggagcaggcgtcgtgggtgtgtcgctgtgaggaccgtgtggtg
cagcagttggagcaggacttcaagctgaccctgcagcagcagaactctctggagcagtgg
gctgcctggctggacggggtggtctcccaggtcctaaagccctaccaggccagcgccgcc
ttccccaaagcagccaagctcttcctgctcaagtggtccttctacagttccatggtgatt
agagacctgactctgcgtagtgctgccagcttcggatccttccacctgatcagactgctg
tatgatgagtacatgtactacctgatagaacacagagtggcccaggctaaaggagagaca
cccatcgctgtcatgggagagttcgccagtcttggcaggagtttgaacccactggatcca
gacaaagaagaggaagaggaggaggaagaggagagcgatgacgagtgtcaggagctgtct
ctgccctctgacggggcggggctgggggaggagtctctggagccgcctaccaagctggcc
agaaccgaccagagagtactcttcactacgggccaggactga
DBGET
integrated database retrieval system
