Oncorhynchus keta (chum salmon): 118378697
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Entry
118378697 CDS
T09424
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A isoform X2
KO
K20165
TBC1 domain family member 2A
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118378697 (tbc1d2)
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118378697 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
PH_8
PH_3
Sec20
Motif
Other DBs
NCBI-GeneID:
118378697
NCBI-ProteinID:
XP_035621578
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All DBs
Position
4:complement(55122884..55148496)
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AA seq
985 aa
AA seq
DB search
MEGEDPEGNPSTASSHSLPPQAEAVSPADEDDCITTGRNFEETATRTNGMGQPSQDHQSE
GVPAKTAATDNNQSQSATTMDNQAQQQPTESPSITKLCGYLLKQGGPLKSWKWRWFTYEE
KKSQLFYYRTAQDVTSLGRIELCRATFGYPLHGEQGTFHIQTPERTFVLKADNQEAMMYW
LQQLQLKRWQHRDQLTGESTRHCTDHQRPEGQGELPTSCPDDFLPTMKTPPGLLGEEAAN
LPAPQQRAPLSNFSLKHPLIEIQNSVHSLFYKRSSQELSRSVFHLEAPPPWTPYQTAQDR
LDPRTPVDPPTPTTPLLLADPAGERSPGEGRLFTCPSPRTRRKTRGSSATMPAALREAAS
DKTTRLQQEKHMLAEEVKAQKELVWLLHKALEAAQLEKRTCTEFLAAKCEQERLELLRHR
ERQAADLQGRLEELKVEAEGLRASLAQRDAHVAELKENVTLMMAKNNSKQEVILKLSEQV
AACMTDPRRTMSTTNGLEALTFHQLQEDTENLKDDIEAYKIQNKFLNSEIYQLTKLWRNS
SEQEKSLMVKCAYLEARNCQIESRYLGVLRKLQESKALEPGQREAVRNLIEDALKGDLND
VLKLNPVREHDEYGFKIIPDYEVEDMKLLAKIQALEIRSHNLLRQEAGVKPLLDRWAQYL
GGRPADDLCPSPELKFLLRCGVPREYRPRVWRWVVRARTRSLRERHPDRYEQLCQKSLTS
PHQASRQIQLDLHRTLTTNQRFSSPSSPTLQQLQRILLAFSWQNPTIGYCQGLNRLAAIA
LLVLESEEDAFWCLVAVVETIMPQDYYTKTLIASQVDQRVLKDFMAEKMPRLTAHFEEHS
VDVSLITFSWFLVVFVESLPSDILLRVWDAFLYEGTKVIFRYALALFKYKEEDILNIHDN
VEIYQYLRFFTKTISDGRKLTNIAFSDMNPFPMKLLKNRRVLHLERLQGELRELEAQQRE
FVTESAERKDKDLDTILVSEDDEDL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggacccagaaggaaatcccagcactgcctcgtctcactcacttcctccc
caagcagaggcggtaagcccagcggatgaggatgattgtatcacaacagggaggaacttt
gaagagaccgctacacgcacaaacggcatgggccagccgagtcaggaccaccagagtgaa
ggggtcccagctaagactgctgccacagacaacaaccagagtcagtctgccaccaccatg
gacaaccaagcccagcaacaacccacggaaagcccgtctatcactaaactatgtgggtat
ctccttaaacaaggaggtcccctgaagtcgtggaagtggcgctggttcacgtacgaggag
aagaagagccagttgttttactacaggacggcgcaggatgtgacctctttggggaggatt
gagctgtgcagagccacgttcggttaccccctccacggagagcagggcacctttcacatc
cagacccctgaacggaccttcgtcctcaaggcagataaccaggaggccatgatgtactgg
ctacaacagctgcagctgaagagatggcagcaccgtgaccagctgacaggagaatccaca
cgtcactgcactgaccaccagagaccagagggacagggggaactacccaccagctgccca
gatgacttcctgcccaccatgaaaaccccgccaggcctcttgggtgaggaggctgccaat
ctgcccgcaccgcaacaacgcgcccccctaagcaacttctccctcaaacatcctctgata
gagattcagaactcggtgcacagtcttttttacaagcggtcctcccaggaactgagtcgg
agtgtgttccatttggaggcgcctcctccttggaccccctaccagacagcccaggacagg
cttgaccctaggactcccgttgaccccccgactcctaccaccccgctgctgttggcggat
cctgcgggtgagcgttccccaggggagggcaggttgttcacatgcccgtccccgaggacc
aggaggaagacgaggggcagctctgccaccatgcccgctgcgctacgggaagctgcttca
gacaagactacccgccttcagcaggagaaacacatgctggctgaggaggtcaaggcccag
aaggagctggtgtggcttctccacaaggcccttgaggcggctcagctggagaagcggacc
tgcacggagttcctggctgccaagtgtgagcaggagcgtctggagctgttgaggcaccgc
gagcgccaagccgctgacctgcagggtcgtctggaggaactgaaggtcgaggcggagggt
ctgagggcaagcttggcccaaagggacgcccacgtggccgagctgaaggaaaacgtcacc
ctgatgatggcgaagaacaactccaaacaggaggtgatcctgaagctgtcagagcaggtg
gcggcctgcatgaccgacccaagacgcaccatgtccaccactaatggcctggaggccctg
accttccaccagctgcaggaggacactgagaacctcaaggatgacattgaggcctacaag
atccagaacaagttcctgaactctgagatctaccagctgaccaagctatggcgcaacagt
tcagagcaggagaaaagccttatggtaaagtgtgcctacctggaggcccgtaactgtcag
atagagagtcgttacctgggtgtactgaggaagctgcaggagagcaaggctctagaaccg
ggccagcgggaggctgtgaggaacctcatagaggacgcactgaaaggagacctgaacgac
gtcctcaaactcaaccctgtcagggagcacgacgagtacggcttcaagatcatcccggac
tatgaggtggaggacatgaagctgctggccaagatccaggccctggagatccgctcccac
aacctgctgaggcaagaggccggggtcaaacccttgttggaccgctgggctcagtacctg
ggcggccgcccggccgatgacctctgcccctccccggagctcaaattcctgctgcggtgt
ggcgtgccacgggagtaccgcccacgggtgtggcgctgggtggtaagggcacgcacacgc
tcgctgagggagcgccacccggatcgctatgagcagctgtgccagaagagccttacgtca
ccccaccaagcctccagacagatccagttggacctacaccgcacgctcaccaccaatcag
cgcttttcctcgccctccagccccactctgcagcagctccaacgaattctgctagctttc
tcctggcaaaatcccaccatcggttactgccagggcctcaacaggctggcagccatagct
ctcctggtgctggagagtgaggaggatgccttctggtgtctagtagctgtggtggaaacc
attatgcctcaggactactacaccaaaacactcatagcctcgcaggtggaccagcgtgtg
ctgaaggacttcatggcggagaaaatgccccgactgacagcccactttgaggagcatagt
gtggacgtgtccctcatcaccttcagctggttcctggtggtgttcgttgagagcctgccc
agtgacatcctcctgcgggtgtgggacgccttcctctacgagggcaccaaggtgatattt
cggtatgccctggctctgttcaagtacaaagaggaggacatcttgaacatccatgacaac
gtggagatctaccaatacctgcgcttcttcaccaagaccatctctgacggcaggaaactg
accaacatagccttcagcgacatgaacccattccccatgaagctgttgaagaaccggcgt
gtgctgcatctggagcgcctgcagggggagctcagagagctggaggcccagcagagggag
tttgtcacagagagcgcagagcgtaaggataaggacctggacactatacttgtcagcgag
gacgatgaggacctgtag
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