Oncorhynchus keta (chum salmon): 118378796
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Entry
118378796 CDS
T09424
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118378796 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118378796 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118378796 (usp16)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118378796 (usp16)
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118378796 (usp16)
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118378796 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
118378796
NCBI-ProteinID:
XP_052324728
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All DBs
Position
18:51034103..51080143
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AA seq
805 aa
AA seq
DB search
CGRTSEDQHAIKHYEKPRSDPHCLVLSLDNWSVWCYICDDDVQYSKTGHLAQLVNNIKKQ
ALSEPRKQSPQRKHSIVKLEDSMIEEPQETKAEEKEENTVTQPKENQKKNGKKENGLKES
SSLTRGQKAVGGASSGAVGGASSCPLSVRGLSNLGNTCFFNSVVQALSQTQMLRQVINKV
TAEEKTGVTITPGVSSDLEPILVQLGPPGSLTVAMCQILNEIQETKKGVVTPRELFSQVC
KKAARFKGFQQQDSQELLRYLLDGMRAEEMKRLNSGISEALKKHGRDAEQSKKLVKEYEK
KGAPNNFVDQVFGGEMTSTVMCQQCKTVSLVKEMFLDLSLPVSDQAYRKKSQKKGVGNQK
ASTEEKYNNGDSPSPVSMTNGDTHDLPTGSKYQQKKQKKQAKKQAKNQRRQQKLVPLDSF
TPPENTAESPVPAEEGEETGNSTQGEEEEEPLVESQSSETERSETAPSEQDQEKPQGAGR
MEKDEEDCEPVAVSNNHSTVMSEEQSHQSPEGVGKRDGHEAEHRGEEEEEENDDGDAAQP
SGDEQDTKLTDKLGELSLNEAFLASEDSDLELGCRDGDTSAETESETKLEGKEYTVSHQD
PKLAFHTLATRAAPGNQECSVESCLYQFTEVENLTQNNSLLCVTCTKRQTKNKAAEGSKK
VYTDALKQMLISSPPPVLTLHLKRFQQIGYSVCKVNSHVNFPHILDVAPFCSVICKGVSE
GGSRVLYSLYGIVEHSGTMRSGHYTAYVKARPFYPSTTHTGVATHGEPEPVKGAWFHVSD
SSVQPVTESKVQSSQAYLLFYERIS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
tgtgggcgtacctctgaggatcagcatgctatcaagcactacgagaagcctcggtcagac
cctcactgtctggtgctcagcctggacaactggagcgtttggtgttacatctgtgatgat
gatgtccagtactctaaaacaggccatctggctcagttggtgaacaacattaagaaacag
gccttgtctgagccccggaaacaaagtccacagagaaagcattcaatagtgaagctggag
gacagcatgatagaagagccacaggaaaccaaggcagaagagaaggaagagaacacagtg
acacaaccgaaagaaaaccagaagaagaacggcaagaaagaaaatggtttgaaagagagc
agcagtttgactagaggacagaaggccgtgggaggagccagcagcggtgcagtgggagga
gccagcagctgtccgttgtcagttagaggactcagtaaccttggaaacacctgtttcttc
aactctgttgttcaggccctctctcagacacagatgttgagacaggtcatcaacaaggtg
acagctgaagagaagaccggtgtcaccatcacacctggagtctcctcagacctggaaccc
atcctggtacagctaggtcctccggggtctctgaccgtggcgatgtgtcagatcctgaat
gagatccaggagactaagaagggggtggtcaccccgagagaacttttcagtcaggtctgc
aaaaaagcggcacggtttaaagggtttcagcagcaggatagccaggagcttctacgctac
ttgctggatgggatgagagccgaggagatgaaaagactgaactctggaatatcggaagca
ctgaaaaaacacggaagagatgctgaacaatcgaagaagttagtcaaggagtatgagaag
aagggagctcctaataacttcgtagaccaggtgtttggtggggagatgaccagcacagtc
atgtgtcagcaatgcaagacggtttctttggtcaaggagatgtttctggatctgtccctt
cctgtctcagaccaggcctacaggaagaagagccagaagaaaggagtggggaaccagaag
gctagcactgaggagaaatataataacggagacagccccagccctgtctccatgaccaat
ggagacacccacgaccttcctactggcagcaagtaccagcagaagaaacagaagaaacag
gccaagaaacaggccaagaaccagagacgtcagcagaagctagtccccctggacagcttc
acacctccagagaacaccgcagagagcccagtaccagcagaggagggggaggagacagga
aatagtacccagggagaggaggaggaggagcctctggttgagagccaatcatcagagacc
gagaggtccgagaccgctccctcagagcaggaccaagagaaacctcagggggcagggcgc
atggagaaagatgaggaggattgtgaaccggtggctgtgtccaacaaccactccactgtg
atgtcagaagagcagagtcaccagtcccctgagggggttggaaaaagagacggacacgag
gctgaacatagaggagaggaggaggaggaggagaatgatgatggtgatgcagcccaaccg
tctggagatgagcaagacaccaaactgacagacaagctgggtgaactatctctgaacgaa
gccttcctagcctctgaggactcggacctggagctggggtgcagagatggagacacgtct
gctgagacggaatcggagacaaagctggaggggaaggagtacacagtctctcaccaggat
cctaaactggcctttcacacgctggccaccagggcggcgccagggaaccaggagtgctct
gtggagtcctgtctctaccagttcacagaggtagagaacctcactcagaacaactctctt
ctctgtgtcacctgcaccaagagacagaccaaaaacaaggctgcagaaggctccaagaag
gtgtacaccgatgctctgaagcaaatgctgatctcgtctccccctccggtgcttactctt
cacctgaagagattccagcagattgggtacagtgtgtgtaaggtgaacagccacgtcaac
ttccctcacattctagacgtagcaccattctgctctgtcatatgcaagggtgtgtcggag
ggaggctctcgggtgctttacagtctgtatggtatagtagaacacagtgggactatgaga
agtggtcattatacagcctacgtcaaagccagacctttctacccctccacgacacacacc
ggagtggccacacatggtgagccagagccggtgaaaggggcgtggttccacgtgagtgac
agtagtgtgcagccagtcacggagagcaaagtgcagagctcccaagcctacctcctattc
tacgagaggatctcctag
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integrated database retrieval system
