Oncorhynchus keta (chum salmon): 118378916
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Entry
118378916 CDS
T09424
Name
(RefSeq) homologous recombination OB-fold protein isoform X1
KO
K27803
homologous recombination OB-fold protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118378916
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118378916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
118378916
NCBI-ProteinID:
XP_052347523
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Position
32:34490480..34495321
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AA seq
638 aa
AA seq
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MDYLTLGRTSMMRCCKLIYTDLLEMDWSAPSVSASTLSSAAQSCFLRSTAASTPAAPYGQ
NNSHQPTTEGILAHRGLSNGPGSDNSTPNSVGQSPALGLRQLSTSKPLPSFPLPPLHLPT
LSRGLCTVTQQSSSPAQQMKSNTTGQQEAPSPQDDFDDWDVDLADLDESDPQMSTWAQVR
ETAPAADLTKPSDDSVSPAKRLRPTACGGGQTGPNVGLRGFSTSNQTSGLPSSSSILHRS
SFPGPFPSPHPDPSATFLLAPPQSPVFPGLAMASSPFPRPVTPRPVRGLPSQVQRPWSTP
LAQGRSLFDPISPAPSSRFGGPMPSPSLTPRSLHTPVFTNHLIQLVSNSNKTPQRPGSDH
IRPNTRRFPGPAGILPQQQLHGQSLDDIVVAIPQTPAHGAVARLPSQVPSSQTEEDDFSG
GPWAAMKAEMGLDERNSSCFLHSYSVAMVLRKAALKQLVKNKVPNMAVVLKSILHTHADA
KAVFRDPTGEMQGTVHRRLLEDRLGELKTGAVLLLKQVGVFSPSHRNHYLNVTPNNLLRI
YPPDGSTPSSTQSQLLPLPLEPMLESPDQSSSVPGAPVSQMELFYDDEDVRAPQVSADSG
AGSSSVPQGPPAAPLDLSWDADDLDELLGELPVESYCL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaacgttggggaggacttcaatgatgaggtgctgcaaactgatttacaca
gatctacttgagatggactggtctgctccatcagtgtctgctagcacactgtcctctgca
gcacagtcctgtttcctccgttcaactgcagcatcaactcctgctgccccctatggtcag
aataactcacatcaaccaaccacagaaggcatacttgcccataggggcctgtcgaatggc
ccagggtcagataattcaacaccgaacagtgtaggacagtctcctgctttgggtttgaga
cagctctctacatctaaaccattgccctcattccctcttccccctctccaccttcctaca
ctgagtaggggactgtgtacagttacccaacagagctcctcaccagctcaacagatgaag
tcaaacacaacaggacaacaagaggccccctcgccgcaggatgactttgatgattgggat
gttgacctggcagacctagatgaaagtgacccacagatgagcacttgggctcaggtccga
gaaactgctccagctgcagatctaaccaagcccagcgatgactctgtatccccagccaaa
agactacggcccacagcctgtggtggtggtcaaaccgggcccaatgtgggtctgagagga
ttcagtacctctaaccaaacgtctggtcttcccagtagtagtagtatactccacaggtcc
tcattccctggtcccttcccctctccccaccctgatcctagtgctaccttcctcctagct
ccaccccaaagcccagtgtttcctggcctcgccatggcctccagccccttccccaggcct
gtgacccccaggccagtcagaggacttccttcccaggtacagaggccctggtctacacct
ctggctcagggacgcagcctttttgaccccatctcaccagccccctctagtaggtttggt
ggacccatgccttcccccagtctcaccccccgttccctccacacgcccgtcttcactaac
cacttgattcagctggtgtccaactccaacaagaccccgcagagaccgggttctgaccac
atccggcccaatacccgccgcttccccgggcctgcaggaatcctaccacaacagcagctc
catgggcagagcctggatgacatcgtggtggccattcctcagacacctgcacatggggcc
gtggctcgactgcccagtcaggttcccagctctcagactgaggaagatgatttcagtgga
ggtccgtgggcagcgatgaaggcagagatgggattggacgaaaggaactcctcctgtttt
ctgcactcttacagcgtggccatggtactccgcaaggcggccctgaaacagctggtgaag
aacaaggtccccaacatggctgtggtactaaagagcatcctccacacacacgctgatgcc
aaggctgtgttcagggatcccacaggagagatgcagggcacagtgcaccggcgcctccta
gaggacagactaggggagctcaagacgggggcggtactgctgctcaaacaggtgggtgtg
ttctctccgtcccaccgtaaccactacctgaacgtgacacccaacaacctcctgaggatc
taccctcctgacggctcgaccccgtcctccacacagagccagctgctcccactccccctg
gagccaatgttggaatcacctgatcagtcctccagtgtcccaggagcccctgtgtctcag
atggagttgttctatgatgatgaggatgttcgggccccacaggtctctgcagactctggt
gctggctcctctagtgttccacagggcccgcctgctgcaccactggacctgtcctgggac
gcagatgaccttgatgagcttcttggggagttgcctgttgagtcctactgcctctga
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