Oncorhynchus keta (chum salmon): 118378936
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Entry
118378936 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118378936
04121 Ubiquitin system [BR:
oke04121
]
118378936
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118378936
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118378936
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118378936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
C1_2
zf-RING_6
HypA
Motif
Other DBs
NCBI-GeneID:
118378936
NCBI-ProteinID:
XP_035621824
LinkDB
All DBs
Position
34:78851260..78865459
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AA seq
324 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGTNGTDDTAT
QFAELWHLLFVERPFTVDGDSPDSEPRVPGGGVGVGSGGLGLGGLGGLGGLGGGPIGGSV
PAGLGGPLGGPMGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFAN
SGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTVN
VSQDQADSSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGED
SNTQNPPESPSLNTDPRTQERWSF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcactaacgggacagatgacacagccaca
cagtttgcagagctgtggcacctgttgtttgtagagaggcctttcacagtggatggtgac
agtccagactcagagccccgggtccctggtggaggggttggggtaggatcgggggggtta
ggtctgggggggctgggagggctaggaggtctgggaggaggtcctatcggagggtcagtc
cctgctgggctaggaggacccctggggggtcctatgggagggggggaacactgggggccc
ggtcgcccccctcgcctgcacagtcagcggaggtaccgctccagagggagcagcagacct
gaccgctcacctgccgtagaggggatagtacaacagtttctggctggtctatttgccaac
tctggagttcctggctcacctcccctctcttggacggggatgctccactctaacccaggg
gactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcagttt
gagaacacgggtcctcctcctgcagagaaagagaagatctcctccatacctacagtcaac
gtgtctcaggatcaagcagacagcagtatggagtgtccggtgtgcaaggaggactttgca
gtgggagagcccgtcagacagctaccctgcaaccacttcttccactcagactgtatagta
ccctggctggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaagac
agcaacacccagaaccccccagaatccccctctctaaatacggacccccgcacacaggag
agatggtccttctga
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