Oncorhynchus keta (chum salmon): 118378998
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Entry
118378998 CDS
T09424
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118378998
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118378998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
118378998
NCBI-ProteinID:
XP_052372099
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHHSFEMKASQPNVEQLKLNPVSI
NSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAVT
ERSSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttaaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaagaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccatcactct
tttgaaatgaaagcttcacagccgaatgtcgaacaacttaaactgaatccggtgtccatc
aactcgcccccatcagaaaataacgcggccccggcccaaaagccaaagatttggtctttg
gcagagacagcaacaactcctgacaatccccgcaaatctccgcaaatgaatggcagcaac
acagttgggcccgcggcccagaccataatcagccctcatcacagactcatctcttgtcct
gttggaaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcattactg
aactcgaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctctac
agcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtcaca
gagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagtt
catagacggcctcaaaatcaactcgaagcagccatggttctgtcagctctcgcctcctcc
tag
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