Oncorhynchus keta (chum salmon): 118379028
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Entry
118379028 CDS
T09424
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04814
Motor proteins
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118379028
09142 Cell motility
04814 Motor proteins
118379028
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118379028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118379028
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118379028
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
118379028
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118379028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
118379028
NCBI-ProteinID:
XP_052332427
LinkDB
All DBs
Position
23:14000813..14018860
Genome browser
AA seq
656 aa
AA seq
DB search
MADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKRGGEGGAAGAPDSSD
LEKKRREAEALLQSMGIAPDITNAQPLRVITEDTCLFHYLVPAPMSPSAKSMCSETGSQD
SGDGNSRTLHWDPDPSTLQLHSDSDLLGRGLRLGMAKVTQVDFPPKQSVSYSKETQTPTC
TQTHTQAKPAEEEEEEEMAEPKPAEESQEEKADQEEKQEEVTPKDLTEEEKMQLLHSEEF
MAFFDRGSRIVERALSERVDVCFDYSGRDLEDKEGEMQAGAKMSLNRAFSDERWSKNRVV
TCLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYTFHCQSAVMSAAFAR
FHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISIS
TDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRH
GSKAGISDVFEGHHGPVTGLSCHSAGGPVDFSHLFISASFDWTVKLWTTKSTRPLYSFED
SCDYVYDVMWSPTHPALFACVDGSGRLDLWNLNNDTEVPSASVCVNGSPALNRVRWAHSG
REIATGDSDGQVLVYDVGEQICVPKADEWTRLVHTLVEINENRDEGEELAAQRLVA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaacaggataagagtgagctgaaggcggagctggagaggaagaaacaacgc
ctggcccaaatcagagaggaaaagaagagaaaggaggaggagaagaacaagaagaaggat
gggtctgactctaagcggggaggggaggggggtgcagctggggcaccagactcgtctgac
ctggagaagaagaggagagaggctgaagctctactgcagagcatggggatcgccccggat
ataaccaatgcccagcctctgagagtaataacagaggatacgtgtttgtttcactatcta
gtccccgcccctatgtctccctcagccaaatcaatgtgcagcgagacaggaagccaggac
tctggagatggaaactctaggacgttacactgggatcctgacccctctactctgcagctg
cactctgactccgacctactggggcgtggtttgaggcttggcatggcaaaggtgacccag
gtggatttcccacccaaacagtctgtgtcctactccaaggagacacagacccccacctgt
acacaaacacacacacaggccaaaccagcggaggaggaagaggaggaggagatggctgag
cccaagccagcagaggagtcccaggaggagaaagctgatcaggaggagaagcaggaagaa
gtcactcccaaagatctgactgaagaggagaagatgcagcttctccactcggaggaattc
atggcgttcttcgatcgagggagcaggattgtggaacgggctctgtctgaacgagtagac
gtctgctttgactacagcggccgagacctggaagacaaggagggtgagatgcaggcgggg
gctaagatgtctctgaacagggcgttctctgacgaacgttggtccaagaacagggtggtc
acctgtctggactggtctcctcagtaccctgagctgctggtggcctcctacaacaacaac
gaggatgctcctcatgagcctgacggagtggctttggtctggaacatgaagttcaagaag
acaacacctgaatacaccttccactgccagtctgcagtgatgtcagcagcgttcgccagg
ttccatcctaacctggtcgtgggcgggacttactcaggccagatcgtcctatgggacaac
aggagcaacaagagaacacctgtacagagaactcctctttctgcatctgctcacacgcac
ccagtgtactgtgtgaacgtggtggggacccagaatgctcacaacctcatcagcatctcg
actgatggaaagatgtgctcctggagcctggacatgctgtctcaaccacaggacagtctg
gagctggtgtttaagcagtctaaggcagtagcagtgacctccatggcttttccgctgggt
gatgtgaacaactttgtggtcgggagtgaagatggatcagtctacaccgcctgccgtcac
gggagtaaagcaggtatcagtgatgtatttgagggacatcatggtccggtcactgggttg
agctgtcacagtgctgggggtcctgtggatttctcccatctgttcatctctgcctccttc
gactggaccgtcaagctgtggaccaccaagagtacccgtcctctgtattcatttgaggac
agctgtgactatgtgtatgatgtcatgtggtctcccacacaccccgccctcttcgcctgt
gtagacggatctggacgcctggacctgtggaacctcaacaacgacacagaggtgcccagt
gcaagtgtgtgtgtgaatgggtctcctgctctgaaccgtgtgcggtgggctcactcaggg
agagagatcgctacaggagactcagacggacaggtgctggtgtatgacgtaggggagcaa
atctgtgtgcccaaggcagatgaatggacccgtttggtacacacgctggtggagatcaac
gagaaccgtgatgaaggagaggagctggccgcgcagcgcctagtcgcctga
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