Oncorhynchus keta (chum salmon): 118379065
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Entry
118379065 CDS
T09424
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118379065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118379065
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
118379065
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
118379065
NCBI-ProteinID:
XP_052329193
LinkDB
All DBs
Position
2:17837509..18094572
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AA seq
1207 aa
AA seq
DB search
MPKGKHSYYPDSPSIRISKMDVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILL
WRTLKYLWTVCCHCNTKKKNAQRVHNPTSHGDGIKHTKETVAALSEVGWMTSVKDWAGVM
ISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYF
GLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFL
NILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVT
MSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKH
IVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGS
VLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYH
NKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTW
QKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDIRESSTLINPG
NHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRSKNNYNGYIKSI
EEEQYSTLSPKKKQRNGDTRNSPNGSPKMMRHDPLLMPGNEQIENMDMNVKKYDSTGMFH
WCQSKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALVGLRNLVMPLRASNFHYHELKP
IVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDA
SLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPLHGGLVRQASITT
GANIPIITELGMSAVNDANVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATY
FNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFA
DLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQSHTSQCTKRYVITNPPYGFELVP
SDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSLTATNRTNRAKSRDSRDKQN
ATRMNKMGQEKTWFTDEPENAAYHRNIHIKPMSTSHSSHTANHQVNQNPYKSTNNHIPSI
REVEDEC
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggtaaacatagttactacccggactctccctctatccgcatatccaagatg
gatgtgatcatccccttctccccagatgtgccctgtgatagcaacgggcagcgcatgtgg
tgggctttccttgcctcctccatggtcacgttctttgggggtctcttcatcattctgctc
tggagaactctcaagtacctgtggaccgtctgctgccactgtaacaccaaaaagaagaat
gctcagcgggtccacaaccctacctcccatggggatgggatcaagcacaccaaggagacg
gtggctgcactcagtgaggtgggctggatgacctccgtcaaagactgggctggggtcatg
atatcagcccagacactgacgggcagagtcctggtggtgcttgtctttgccctcagcatc
ggagctcttgtaatatacttcatagattcctctgaccccatcgagtcctgtcagaacttc
tacaaagacttcacgctacagattgacatggctttcaacgtcttcttcctcttgtacttt
ggtctacggtttattgcagccaatgacaagctttggttctggctggaggtgaactcagtg
gtggacttcttcactgttcccccagtgttcgtgtctgtttatctcaacaggagctggctt
ggcttgaggtttttaagggcgttaaggttgatacagttctcagaaatcttacagtttttg
aacatattaaaaacaagcaattccataaaactggtgaacttatgttcaatcttcataagt
acatggctaacagcggcaggcttcatacatctggtggaaaactcaggggatccttgggaa
aacttccaaaattcccaagcactttcctactgggaatgtgtctacttactcatggttact
atgtccactgtgggctatggagacgtgtatgcaaaaaccaccctgggacgacttttcatg
gtcttcttcatccttggtggtttggccatgtttgcgagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcac
atcgtggtctgtggtcatataacacttgaaagtgtgtccaacttccttaaagacttccta
cacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaat
cttgagctggaagccttgtttaaacgccacttcacccaggtggagttctaccagggatct
gttctcaacccacatgacctggccagagtcaagatagagtcagcagacgcctgtttgatc
ctagctaataaatactgtgcagaccctgatgctgaggatgcctccaacatcatgagggtg
atatccatcaagaactaccacccaaaaatcagaatcattacccagatgttgcagtaccac
aacaaggcccaccttttgaatattcctagttggaactggaaggagggtgacgatgccatt
tgccttgctgagctgaagctgggcttcatagcacagagctgtctggctcagggcctgtcc
accatgctggccaacctcttctccatgaggtccttcatcaagattgaagaggacacgtgg
cagaagtattacctggaaggagtagccaatgaaatgtacactgagtatctgtctagtgcc
tttgtgggcttatccttcccgaccatttgtgaactctgctatgtgaagctgaagctgcta
ctgattgctatcgagtacaagtctgatataagggaaagcagcaccctcatcaaccctggg
aaccatgtgaagatgcaggaaggaaccctgggcttctttatcgccagcgatgccaaagaa
gtaaagagggcactcttttactgcaaagcttgtcacgatgacatcacagatcccaaaagg
ataaagaaatgtggatgcaaacgatcaaaaaataactataacggatatatcaaatcaatc
gaagaggagcagtattcgacactgtcgcctaaaaagaaacaacgtaatggagacacaagg
aactcacccaacggttcaccaaaaatgatgaggcatgaccctctcctcatgccggggaac
gaacagattgagaacatggacatgaacgtgaagaagtacgactccacagggatgttccac
tggtgccagtccaaagacatcgagaaggtcatcttgaccagaagtgaagctgccatgact
gtcctaagcggccacgtggtcgtctgtatatttggagacgcgaagtcggctttggtgggt
ctaaggaaccttgtgatgcctctgagagctagcaacttccactaccacgagctgaaaccc
atcgtgtttgtgggttctctggagtacctgaagagggaatgggagacccttcacaacttc
cccaaagtctccatcttacctggcacaccattaagccgggccgatctgagggctgtcaat
atcaacctctgtgacatgtgtgtcatcctgtcggccaatcagaacaatattgacgacgcg
tcactgcaggacaaggaatgcatcctggcgtcactcaacatcaagtccatgcagtttgac
gacagcatcggggtcttgcaggctaactcccaaggtttcactccaccaggcatggacagg
tcctctcctgaaaacagtccacttcatggggggttggtccgacaggcttccatcacaaca
ggggccaacatccccatcatcactgaactaggtatgtcagcagtgaatgacgccaatgtt
cagttcctggaccaggatgatgatgatgaccctgacacagaattgtacctcactcagccc
tttgcctgtgggacggccttcgcagtcagtgtgctggattccctgatgagtgcgacatac
ttcaatgataatatcctcaccctgatccggacgctggtaacagggggggccactccggag
ctggagggtctgttggcggaggagaacgcattacgaggaggctacagcacgccgcagacc
ctcgctaaccgggacaggtgtcgtgtggcacagctagccttgtacgacgggcctttcgct
gacttgggagatggtggctgctacggtgacttattttgtaaagctttaaaaacatacaac
atgctgtgcttcggaatttatcgattaagagacgcacatttaaacacacaaagtcataca
agtcaatgcactaaacggtatgtgataaccaatccgccatatggttttgagttggtgcca
tcagacctgatcttctgcctgatgcagtttgaccacaatgcgggtcagtccagggccagc
ctctcccacagctcccactcctcccattcttccagcaaaaagagctcctccgtccattct
ctcactgccaccaaccgtaccaaccgcgccaagagcagggactcgcgggacaaacagaat
gcaacaaggatgaataaaatgggccaagaaaagacatggtttacagatgagcctgagaac
gcggcctaccacaggaacattcacatcaagccaatgagtactagtcacagtagtcacaca
gccaaccaccaggtcaaccagaacccttacaaatccaccaacaaccatattccatccatc
agagaggtggaggacgaatgctga
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