Oncorhynchus keta (chum salmon): 118379078
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Entry
118379078 CDS
T09424
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
oke04980
Cobalamin transport and metabolism
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118379078
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118379078
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118379078
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118379078
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118379078
03029 Mitochondrial biogenesis [BR:
oke03029
]
118379078
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118379078
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118379078
HMT complexes
COMPASS/SET1 complex
118379078
MLL-HCF complex
118379078
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118379078
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118379078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
118379078
NCBI-ProteinID:
XP_052337252
EnsemblRapid:
ENSOKEG00005041053
LinkDB
All DBs
Position
27:4067381..4142232
Genome browser
AA seq
1870 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSINGTAP
LPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTTGVSPATPLPVNSSPKSPVSAS
AVSAQGHPLQGITLVPSIPGSPVPARGPAILKVSAPQSTTGASIVTVRQANQGGKSPVMV
TSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVK
TVAMSPGAQTVKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTV
AQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNL
GKVMSVVQTKPGQTGAVTGQAGSSLQHILQTKGPLPAGTILKLVTSADGTPTTIITTSKA
GATVGGKPTILSYSSMPTSTSKPGTHIIKTIPMSSIGQTGVTGSGMKSPITIITTKMMTP
GTGTPGKIISAMPRTGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPN
VTTLVVKGTTGVTTLGTVTGTVSTSLAGGSVATVAPITTLGTMTTLPGQVTVSAAQAGGQ
ATQVTLITSPSGVEAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHE
TGTTNTATTASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSE
THDTGTTNTQTTASCNMGSNQQQQGSNQQQQGSNQQQQGSSVTKNTTCGSDSPSSPPPSS
SGDLSPLSVSGTSSVPGVLRPETLRTGTTYTSTTARSNMGSDQMGMTLSSSSSDNQSKSS
SGGGGGGGGSPLTSPVCSNPPCETHKTGPTEAGAGGGVGEGGETHETGTTTTSTQANSSM
GIGQTTGTVQRVCSNPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSNPPCETHETGTTN
TPSQTTSNLTGTGTVQRVCSNPPCETHETGTTNTATTAQPGDSTQGDNGTQEAPSSSSAT
TESSASTTSGRAVTTVTQSTPTPGPCVPEISSMSGSSEAVASRAEEEEEAMQTDSLPEGT
VRVVTLEEAAAAGIHVHVEDMEEQNQGEQEGLPAELMSEGGSGGQQTLMVTGLTPEELAV
TAAAEQAAQHAATEEAQAKAIQAVLQAAQHAVMNDGDGGHHTTTIPIVLTQAELAALVQQ
QQQLQEAQALAQAQALAQAQALAQAQALAQAQALAQAQAAAALHNQAAAQHNQPTEGLAP
ADSLNDPASESNTNELAAAVTQAAARLAPSCTLTPTQTMMVTSPAKIQAATTMAEVVNGI
ESAAGRPAPPPAVAKAPLKKDNQWFDVGIVKVTNTVVTHYYLPDEDAAAVDDDSGTIPDY
SQMRKMDLQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHL
TWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTTTPAQLAFMRVFCGPNPSCLVQSSS
LSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEISKDGLAGKPTVKRPGSSPDMKP
AGPKKARSDQ
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagtcctgcagccacggtggaagcgggttttgggttggtccggtcct
gtcccccggcccagacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
ggggggggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag
tggttcattcctgctgtccgtggtgatatcccgcctggctgtgctgcgtatggttttgtg
tgcgacggcactaggctgctggtgttcggagggatggtggagtatggcaaatacagcaac
gatctgtatgaactgcaggctagccgctgggagtggaagcgtctgaaggccaaatctcct
aagaacggccctcctccctgtccccgtctgggccacagcttctccctggtagggaacaaa
tgctacctcttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
tacctgaatgatctgtatacgttggagctgcgtgccggctccagtgtggtgggctgggac
atccccatcacctacggggtgttgcccccgcccagagagagccacaccgccgtcgtctac
acagagaagtcccgtctggtcatctatggaggcatgagtggttgtcgtctgggggatctg
tggatcttagacatagacacactcacatggaataagccctcgatcaacggaacagctcct
cttcctcgcagtctccactctgccacaactatcaccaacaagatgtacgtgttcggaggc
tgggttcccctggtgatggatgacgtcaaagtagcgacacacgagaaggagtggaagtgc
accaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctactggac
tctctagaggataatatccccagggcccgagctggacactgctccgtggccatcaactca
cgcctctacgtctggagcggacgggacggctaccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcgagggtgcagctg
gtgagagctaacaccagtagcctggaagtgagctggggggcggtacctactgcagacacc
tacctgttacagctgcagaaatacgatatcccccccgccccggccgccaccacgaccggc
gtcagccccgcaacgccactgccagtcaattcctcccccaaaagccccgtctcggcctcg
gcagtgtccgcccagggccaccctctccagggcatcaccctggtcccctccatacctggg
agtccagttcctgctcgcggaccagctattcttaaggtgtctgctccccaatccaccaca
ggcgcctccatcgtcacggtgagacaggccaaccagggcgggaaatcccctgtcatggtt
acatcacttcctgctggggtccgaatggtggtgccggcccaggtcgcacagggaacccca
atgggcagcagccctcagatgagtggcatggctgcgttggctgcagcagctgcggccacc
cagaagatcccgccctccacggccaccatgcagctgccagccggtgccaccatagtcaag
acggtagccatgagccctggcgcacagactgtcaaagtagcttcgcctgttatgattagt
aacccagctactcgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgcc
acacccggaacgcccaatcggccaatcatcaccgtgcacaagtctggcacggtgacagtt
gcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagaccatcactctg
gttaagagtcccctcactctggggggaggtggcacgctgctgaccgcggccaaccagggt
caaaacaaagtgatgtctgggaaggacgtgcagcattggctgtctaacctgtccaacctg
gggaaggtgatgtccgtggtccagaccaagcctggtcagacaggagcggtgacaggacag
gctggctccagcctccagcacatcctacagacgaagggtcctcttccggcgggtactatc
ctgaagctggtgacgtcagccgacggcacgcccaccaccatcatcaccacttccaaggcc
ggggccaccgtagggggcaagcccaccatcttgtcctacagcagcatgcctacttccacc
tccaagccgggcacccacattatcaagaccatacccatgtcctccatcggacaaactgga
gtgacaggaagtggtatgaagtcccccattaccatcattaccactaagatgatgacacca
ggcaccgggacaccaggcaagatcatcagcgcaatgcccagaactggggctggtcagcag
ggactcacacaggtggtgctgaagggtgccccaggacaacccggaactattttacggacc
gtccccatgggaggtgtacgtctcgtctccccggtaacggtttccggtgtcaaacctaac
gtcaccaccctggtcgtcaagggaaccacaggtgtgactacgttgggtacggtgactggc
acagtgtcgaccagcctggcaggaggaagtgttgccaccgttgctcctatcaccaccttg
ggcaccatgacgaccctgccaggacaggtcactgtctccgcagcacaggcaggaggccag
gccacccaggtgaccttaatcacttcccctagcggtgtggaggcgcagcctgtccatgac
cttcctgtctccatcctgtcgtcccccacctccgccgacccctcctccacccagcctgag
gcaggcgacccaggcacagtgaccctggtctgctcaaatcccccttgcgagacccacgag
accggcaccaccaatacagctaccacggcctccgctaacatgactggtaacggtggggtg
gagagggtctgctcaaacccgccgtgtgaaacccacgagaccggcaccaccaacactcaa
acgacagcgtcctccaacatgggccaggtacagcaggtgtgcaccaacccgccgtccgag
acccacgatacaggtaccaccaacacccagaccacagccagctgtaacatgggatctaac
cagcaacaacaaggctccaaccagcaacaacaaggctccaaccagcaacaacaaggctcc
agcgtaaccaaaaacaccacctgcgggtctgattccccgtcctctccgcccccctcctcc
tccggagacctctcccccttgtctgtttctggtaccagctctgtgcccggggtgctgcga
ccggagactctgagaacagggaccacctacacctccaccaccgcacgctctaacatgggc
tctgaccagatggggatgacgctcagctcctcgtcctcagataaccagagtaagtcatcc
agtggaggaggaggaggaggaggaggatcccccctcacctctcctgtctgctccaatcca
ccttgtgaaacacacaagactggccccactgaggccggagctggaggaggagtaggagaa
ggaggagaaacacacgagactggcactaccactacgtcgacgcaggccaactccagtatg
ggcatcgggcagacgacagggacagtgcagagggtgtgttccaatcctccgtgtgagaca
cacgaaacagggacgaccaacaccccgtctcagaccacgtccaacctgacagggacgggc
acggtccagagggtgtgttccaatccaccgtgtgagacacacgaaacgggaaccaccaac
accccttctcagactacgtccaacctgacagggacgggcacggtccagagggtgtgttcc
aatccaccgtgtgagacacatgaaacgggcaccaccaacacagctaccacagcccagcct
ggtgactcgacacaaggagacaacggaactcaagaggctccctcgtcgtcctcggcaacc
accgagtccagcgcatcgacgacatctggcagagccgtcaccacggttactcaatccacg
cccacacctgggccctgcgtacctgagatctcatcaatgtctgggtcgtccgaggcggtg
gcatcgagggctgaagaggaagaggaggccatgcagaccgactctctcccagagggcaca
gtgagggttgtgaccctggaagaggctgctgcagctgggatacatgtccatgtggaggac
atggaggaacagaaccaaggggagcaggagggcctgcctgcggagctgatgtctgaaggt
ggctcggggggccagcagaccctgatggtgacgggtttaacccccgaggagctggctgtt
accgctgcagccgagcaggcagcacaacacgctgcgactgaggaggcccaggccaaggcc
atacaggctgtcctgcaggccgcacagcacgctgtcatgaatgatggagacggtgggcat
cacaccaccaccatccccattgtgttgactcaggctgagctggcagccctggtacaacaa
cagcagcagctgcaggaggcccaggctcttgctcaggcccaggctcttgctcaggcccag
gctcttgctcaggcccaggctcttgctcaggcccaggctcttgctcaggcccaggcagca
gcagcactacacaaccaggcagcagcacaacacaaccagcccaccgagggcctggcccca
gcagacagcctgaacgacccagcgtcagagagcaacaccaatgagctggctgccgcagtg
acccaggctgcggcccgattggctccgtcctgcaccttaacccccactcagacaatgatg
gtgaccagcccggctaagatacaggcagctacaaccatggcagaggtggtcaatggaata
gagtctgccgctgggaggccagcacctcctcctgcggtggccaaagccccgctgaagaaa
gacaaccagtggtttgacgttggcatcgtcaaggtgaccaacacggtggtcacgcactac
tacctacccgacgaagacgcggctgccgttgacgatgactctgggacgatcccggactac
agtcagatgaggaagatggatctccagccagggacggcctataaattcagagtggccggg
atcaacacctgtggtcgggggaacttctcagaggtctcggccttcaagacgtgtctaccg
ggcttccccggagctccctgtgctatcaagatcagcaagagcccagacggcgcccacctg
acctgggagcctccgtcggtcacatctggtaagatcattgagtactcggtgtacctggcc
atccagagcgcccagagcggggagcaggccaagcccaccaccaccaccaccccagcccag
ctggctttcatgcgggtgttctgtgggcccaacccttcctgcctggtgcagtcgtccagc
ctctccaacgcacacatagactacaccaccaagcctgccatcatcttccgcatcgcagct
cgcaacgagaaaggttacggccctgccacgcaggtcaggtggctccaagagattagtaaa
gatggccttgcaggtaaacctaccgtgaagcgaccaggttcctcacctgacatgaaacct
gctggtccgaagaaggccagatcagaccagtga
DBGET
integrated database retrieval system
