Oncorhynchus keta (chum salmon): 118379282
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Entry
118379282 CDS
T09424
Name
(RefSeq) TBC1 domain family member 9B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118379282
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118379282
Endosome - Golgi transport
Rab GTPases and associated proteins
118379282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
Ric8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
118379282
NCBI-ProteinID:
XP_052367133
LinkDB
All DBs
Position
4:complement(57392417..57441337)
Genome browser
AA seq
1219 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFCSIACGSSRKEITEHWEWLETNLLQTLSIFDNNEDITTFVKGKISGIIA
EENKSKAALEDEDSGKFREAELKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSLLLGKEVTLVVQWTEVTRLEKNATLLFPESVRVSTRHTEHYFSMFLNVNDTFKL
MEQLATIAMRQLLDNEGFAADHSLPKACKTLKNVSALKRDLDARAKNERYRALFRLTQDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPESGHSGSPSPSTTPLSSSLPTP
TGATGEPSQRRHYSPSLPTATQSLLRIYQKHAPEEHGPKATKEKMKEELWNIHFLEFGRG
VCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMDTHPGYYAERVEQAMGRCTLATEE
IERDLHRSMPEHHAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTSVLLLYCTEEEA
FWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRACLPFLYEHMQELGVISTISLSWFL
TLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLDCNDEGEAMTILGRYLD
NVVNKQTVSPPIPHLHALLTSGDEPPPQIDVFQLIKSSCEKFGSLRADVIEQMRFHQRLK
VIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVHFKAKHIISCYWGASTTAAERHDPSLP
YLEQYRIDLGQFCQLFGALGTWLCGTHTATLAARLFRLLDMNRDGLINFKEFVTGLSGMY
HGDMTEKLKLLYNLHLPPALCPEEAESALEATQFFTDDTPQEPPFLSDLDFLVQEVTSGE
EVKEAEDALGSGDAEEKKEVKDYKYYLRMWAMENEPKKETIKDLRRMNQEQFIELCKTLY
NMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNGANKPTDTINAQAPAPAAELLQPE
KEEPNGESSSGQSLVCRALAEAQLETPPQQTSDEEVKDDTSVSSYSMLSTGSLQCEDIAD
DTVLIGCAGDQQRRGSILDGDWSITFEQVLASMLTEPPLVDYFEKKGDIQARMAICKMQR
RVERQVSSSSDHELAQLST
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaccccagaggaggtgttgcttgccaacgctctgtgggtgagcgaaagggcg
aaccccttcttcattctccagaggagaaagggccatggcaaaggagggggcatcactggc
ttgttggtgggcaccatggatgttgtcctggactccagtgccagagtggctccctatagg
atcctgcaccagacaggggactctcagatcttctgcagcatcgcatgtggctcctcccgg
aaggagatcacagagcattgggagtggctggagaccaacctgctccagacgctctccatt
tttgacaacaacgaagatatcaccaccttcgtcaaggggaagatctcgggcatcatcgcc
gaggagaacaagagcaaggctgccctggaggatgaggactctggcaagttccgtgaggct
gaactgaagatgaggaagctgtttggcatgcccggtgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccggcagggctgggtctacctcagcgtcaac
cacctctgcttctactctctcctcctggggaaagaagtgaccctggtggtgcagtggacg
gaggtcacccgcctagagaagaacgccacgctgctgttcccggagagtgtgcgggtgagc
acgcggcacacggagcactacttctccatgttcctcaacgttaacgacaccttcaagctc
atggagcagctggccaccatcgcaatgcgccagctgcttgacaacgagggcttcgccgcc
gaccactcgctgcctaaggcctgcaagacgctcaagaatgtctcggcactgaagagggac
ctggacgcacgggccaagaacgaacgttaccgggcgctgttccgcctgacccaggacgag
cgcctggatggacacacagactgcacgctgtggactccctttgccaagatgcacatcgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcatccccctcagagaggtatccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaggaccgcgacttcctggtccagcgcatctccgacttcctgcagcgcacccctgaaagt
ggccattcgggttctcccagccctagtaccacccctctctcctccagcctccccacaccc
actggtgcaacaggggaaccgtcccagaggcgccactacagccccagcctgccaacagcc
actcagagcctgctccgcatctaccagaagcacgccccagaggaacacggacccaaagct
acaaaggagaagatgaaggaggagttgtggaacatccacttccttgagtttggcaggggt
gtgtgtatgtaccgtacctccaagaccagagagctggtgctcaatgggatccctgagagc
ctccggggggagctgtggctgctcttctcaggagctcagaatgagatggacacccaccct
ggctactacgctgagcgggtggagcaggccatgggccgctgtaccctggccacggaggag
atcgagagggacctgcaccgctccatgcctgagcaccacgccttccagaatgagatgggc
atcgctgccctccgcagggtcctcaccgcctacgcctgccgcaaccctggcataggatac
tgccaggcgatgaacattgtgacatcggtactgctgctgtactgtacggaggaggaggcc
ttctggcttttggtggctctgtgtgagaggatgctgcctgactactacaacaccagggtg
gtgggtgctctcgttgaccagggtgtgtttgaggagctgacacgcgcatgcctccctttc
ctctacgagcacatgcaggagctgggagtcatctccaccatctccctctcctggttcctc
accctgttcctcagcgtcatgcccttcgacagcgccgtgcttctggttgactgcttcttc
tacgagggcatcaaggtcatcttccaagtggcactggccgtgctgcacgccaacatggac
accctactggactgcaatgacgagggagaggccatgaccatccttggacggtatctggac
aatgttgtcaacaagcagaccgtgtctccgcccattccccacctccacgccctgttgacc
agtggcgatgagccgccgcctcagattgacgtgttccagctcatcaagtcatcctgtgag
aagtttggtagtttgcgtgctgatgtcatcgagcagatgagattccatcagaggttaaag
gtcatccaatcgctggaggacaccgccaagaggagcgtggtaagagccatcatgacagac
tcagccttcagtatcgaggagctcgaggaactctatgttcacttcaaggccaagcacata
attagctgctactggggggccagcaccacagcggcggagcgccacgaccccagcctgccc
tacctggagcagtaccgcattgacttgggacaattctgccagctgttcggggccctggga
acctggctctgtgggacgcacaccgccacgctggccgcacgcctcttccgcctgctggac
atgaacagggacggcctcatcaacttcaaggagtttgtcacgggtctgagtgggatgtac
cacggagacatgacagagaaactcaagttactgtacaatcttcacctgccgccagcattg
tgtccagaggaggccgagtcggcactggaagctacacagttcttcactgatgacactcca
caggaacctcccttcctgtctgatctggacttcctggtgcaggaagtgacctcaggagag
gaggtgaaagaggctgaggacgcattgggaagcggagatgcagaggagaagaaagaggtg
aaggactataagtactacctgcggatgtgggccatggagaatgagcccaagaaggagacc
attaaagaccttcgcaggatgaaccaggagcagttcatagagctgtgtaagaccctgtac
aacatgttcagcgaggacccactggagcaggagctctaccacgccatcgccactgtggcc
agcctgctgctgcgcatcggagaggtgggcaagaagttcaccaacaacggcgccaacaaa
ccaactgacaccatcaacgcccaggctcccgcccccgctgctgaactgctccaacccgaa
aaagaggagccgaacggggagagcagctcagggcagtccctggtctgcagggccttggcg
gaggcccagctggaaacgccacctcagcagacgtcggacgaagaagtgaaggatgacacg
tcggtttcgtcctactccatgctgagcacaggttctctgcagtgtgaggacatcgctgac
gacacagtcctgattggctgcgccggcgaccagcagcggcggggaagcatattggacggc
gattggtccatcacctttgagcaggtgctggcgtcgatgctcaccgagccgcccctggtg
gactactttgagaagaagggagacattcaggcaaggatggctatctgtaagatgcaaagg
agagtggaaaggcaggtgagctcgtcaagcgaccacgaattggcccagctctcaacctga
DBGET
integrated database retrieval system
