Oncorhynchus keta (chum salmon): 118379304
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Entry
118379304 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118379304
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118379304
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118379304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118379304
NCBI-ProteinID:
XP_052380746
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All DBs
Position
9:complement(497241..511760)
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AA seq
181 aa
AA seq
DB search
MSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRYGTWLGAINCPICRQMVTLLFPLFHEHA
APQQVQDGTVEPLLILRDLDDYNRRFSGQPRSLMDRLRDVPTLLRHLFREMFSVGGLFWM
FRIRVLLCLIGALTYLISPLDFIPEALFGLLGFLDDFFIILLLFIYISIMYREVVTQRLA
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtccagtgtgtctacagcaggccgtgctgcctgtggaaaccaactgtggacat
ctcttctgtggttcttgtataattgcatattggcgatatgggacatggcttggtgcaatc
aactgtcccatctgcagacagatggtgaccctgctgttcccgctcttccatgagcatgcc
gcccctcagcaggtacaggatggaacagttgaaccgctcctcatcctccgggatctcgac
gactacaaccgcaggttctcaggacaacccagatcgctgatggaccggctgcgtgacgtc
cccacgttgctacgccacctcttcagggagatgttctccgtagggggcctgttctggatg
ttccggatccgtgtcctgctgtgtctgatcggggctctgacctacctgatctcccctctg
gacttcatccccgaggctctgttcggtctgctcggcttcctggatgacttcttcatcatt
ctgcttctgttcatctatatctctatcatgtatagagaggtggtgacccagagactggca
gcgtga
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