Oncorhynchus keta (chum salmon): 118379346
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Entry
118379346 CDS
T09424
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
oke04261
Adrenergic signaling in cardiomyocytes
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118379346
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118379346
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
118379346
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118379346
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118379346
03036 Chromosome and associated proteins [BR:
oke03036
]
118379346
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118379346
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118379346
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118379346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
118379346
NCBI-ProteinID:
XP_035622262
LinkDB
All DBs
Position
14:complement(29300632..29313714)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFQPMDLMVEASPRRVFANAHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPVNMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDKL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggcggcggaggcaatgatgtgcagtggtgtttctctcaagtcaaagga
gcgattgatgacgatgtggctgaagctgacatcatatccactgtggaattcaatcactct
ggggagctactagccactggggacaaggggggccgcgttgtgatctttcagcaggagcta
gagagcaagaaccagccacagtgccgtggggagtacaatgtttacagcaccttccagagc
cacgagcccgagttcgactacctgaagagccttgagatcgaggagaagatcaacaagatc
cggtggctgcctcagaagaacgctgcacagttcctcttgtccacaaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagcgaccagaggggtacaacctcaaggaagag
gatgggcgctacagagaccccactaccgtcacaacactacgggtcccagtgtttcagccg
atggacctgatggttgaggccagccccaggcgagtgtttgctaatgcacacacctaccac
atcaactccatctcggtcaacagtgactgtgagacctacttgtctgctgatgaccttcgc
atcaatctctggaacctagagatcactgaccgcagctttaacattgtggacatcaagcca
gtcaacatggaggagctgacagaggtgattacagcagcagagttccatccaaaccagtgc
aacacatttgtctacagtagcagcaagggcaccatccgcctctgtgacatgagagcatca
gctctctgtgaccagcactccaaactgtttgaagagcctgaagatccaagcaatcgttca
ttcttctctgagattatctcttccatctctgatgtcaagttcagccacagtgggcgctac
atgatgacccgggactacctgtccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggtccatgaatacctcaggagtaaactgtgctcactctatgagaac
gactgcatctttgataagtttgagtgctgctggaatggaaacgacagtgttgtgatgacg
ggctcatacaacaacttcttcaggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggagagcagtaagcctcgttctgtgctcaagccccgcaaggtgtgcaca
ggtgggaagcgcaagaaggacgagatcagtgtagacagcctggactttaacaagaagatc
ctccatacggcctggcaccctcaggacaacatcatcgccgtggccaccactaacaacctc
tatatatttcaggacaaactgtaa
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