Oncorhynchus keta (chum salmon): 118379354
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Entry
118379354 CDS
T09424
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecule (CAM) interaction
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118379354
04517 IgSF CAM signaling
118379354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118379354
04090 CD molecules [BR:
oke04090
]
118379354
04091 Lectins [BR:
oke04091
]
118379354
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
L1 family
118379354
CD molecules [BR:
oke04090
]
Proteins
118379354
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118379354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_4
C2-set_3
Tissue_fac
C2-set_2
VEGFR1-3_N_Ig-like
Sp38
DUF4318
Motif
Other DBs
NCBI-GeneID:
118379354
NCBI-ProteinID:
XP_052362665
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MCVSQYQRGCSPPALLLLPLFLLSCSHLLAHGAIQIPQNLLQPPTLTKMPESLTAFSLDD
IMLLCEATGIPTPSFRWVKDGKKLNWIGHSGSGNFTAHGDKPLSDYQGHYRCYADNTLGT
AMTHTVKLITESTPTLPKQKRSHKTAEEGASVVLHCNPPRSSTIPHIHWMDKKLLHIGQS
ERVTTGLDGNLYFANVLKNDSRDDYTCNAQYISARTILPKEPISLTVTPSNDVARGRKPQ
LMQPQGPHSSHLALRGHSLVLECIPKGLPTPSVLWKRMDVNLLETGAWTDNHGRWLRFDS
ITQKADGEYECLASNTHGSVTHSYTVTVEAEPYWVKEPPSLLYSPGETVRLDCQAEGIPT
PTVTWSINGEPVAEVDIDPRRRVTGGVLVLKDVVFGDTAVYQCEATNKHGNILKNTYIYV
IELPAQILSSDGVVYQVTEGGVARLHCEAFGSPRPQVTWESEDLQNTLLSDSRVSQLTNG
TLELFNSSREDSGVYTCSITHNNTSITAHLEVLKRTMMLIGPQAVQVTRGGDSWLDCHFT
FDPHLNRPQILWRKDGQKIMESSLGDKYTLLGNGTLRVADVQSADEGLYSCEVITDLDSV
LASGSITVVACPSPPVFLSLSEEQDHNLTLSWTPGNTHNSPTTEFVVEVKEEKHPEGKWE
SHRVTGDVNHLELHLLPYSTYRFRVSGVNRLGRSDPSEISEAYSTQPTVPESYPLNVRSE
STEPGTLVIMWEEIDRRLHNGSGFQYKVSWRQVQEHHWSHTHVPHPPYLVNGTRAFSSYE
MKVQAVNSLGEGPHPVPVIGHSGEDYPLASPSKISVSVDNSSAIVRWQPVDTHTVQGHLL
GYKIYLKRLGSQGGGEHRVIGRREVREIKGGVERGTERKEERWVVEVNGNKTKDVVTGLK
LYSLYELSMTTFNRKGEGPHSPTHPFRTPEGVPGPPASLDFESPSETELTLHWRPPTQPN
GQLVGYVLQYQQISDSRNSPPQVEMIYDPTVTHLPLEGLDPHSRYVFYLRGRTSAGQGPP
ITGECATLLDGVPPSNISTVIGERSVNLSWVPGDRYRNHSFHIKYLSKTVGGKWEESEQV
NTLQAFYSLTGLQPGTQYRLLITHGNYTHWEDEIQTTGPELRGVEGDFATQGWFIGLISA
VVLLLLLLLVLCFIKRSKGGKYAVKDKEESQMDSEARPIKDETFGEYRSLESDGDEKRSV
SQPSLCVESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPAPTGNESSGPASPVNLD
PPPPPIGPSFAGILDRTS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatctcagtaccagaggggctgtagcccccctgccctcctcctcctccctctg
ttcctcctctcctgctctcatctactcgctcatggagccatccagatcccccaaaacttg
ttacagcctcctactctgacaaagatgcctgagtccttaacggccttttcattagacgat
atcatgctgctctgcgaagccactggcatccccacacccagtttccgctgggtaaaggat
ggtaagaagttgaactggattggacatagtggttctggaaatttcacagcccatggcgac
aagccgctcagcgattaccaaggacactaccgttgctacgccgacaacaccctgggaaca
gccatgacacacaccgtcaaactcatcactgaatcgacaccgaccctccctaagcagaag
agatcacataaaacggcagaggaaggagctagtgttgttctccactgcaaccctcccagg
agctccaccatccctcacatacactggatggacaagaaactgctccatataggtcagagt
gagcgtgtgacgacaggtctggatgggaacttgtactttgccaatgtgttgaagaacgac
agtcgtgatgactacacttgtaatgctcaatacatctctgcgaggaccatcctgcctaaa
gaacccatctcactcactgtcacacctagtaatgacgtggctcgtggcaggaagccccag
ctgatgcaacctcagggcccccacagctctcacctggccctcaggggccacagcctggta
ctggagtgtatacctaaagggcttcctactccttcagtattgtggaagcgtatggatgtt
aatctgttggagacaggagcctggacagataaccatggcaggtggcttcggtttgacagc
ataacccagaaggcagacggagagtatgagtgtctggcttcaaacacacatggatccgtc
acacactcctacactgtcactgtggaagctgagccgtactgggtgaaggagcccccgtca
ctgttgtactcccctggggagacagtgaggctagactgtcaggccgagggtatccccacc
cctactgtcacatggagtataaacggagagcctgtcgcagaggtagacattgaccctagg
cggcgggtgaccggaggggtgttggtcctaaaagatgtagtgtttggtgatacggcggta
taccagtgtgaagccaccaacaaacacggaaatatcctcaaaaatacttacatctatgtc
attgagctgccagctcagatcctgtcctctgatggggtggtatatcaagttacggagggg
ggcgtggccagactgcattgtgaggccttcgggtcaccccgtccacaggtcacatgggag
agtgaggatctccagaacaccctgctgtcggacagtcgtgtgtctcagctaaccaatggg
acgttagagctgtttaatagtagcagggaggacagtggagtctacacctgctccattaca
cacaacaacacctccatcaccgctcacctggaggtcctcaaacgtacgatgatgctgatc
ggtccccaggctgtacaggttacgaggggaggagactcctggttggactgtcatttcacc
tttgacccccatctgaaccgaccccaaatcctctggaggaaagacggacagaagatcatg
gagtcatcactgggagacaagtacactctacttgggaatggaaccctcagagtggcagac
gttcaatcagcagacgaagggctttactcctgtgaggtcatcacagatctggacagcgta
ttggccagtggctccatcactgtagtggcctgtcccagccctccagtgtttctgtctctg
tctgaagagcaggaccacaacctgactctcagctggacacctggaaacacacacaactcc
cccaccacagagtttgtggtggaggtaaaggaggagaaacatcctgaggggaagtgggag
tcacaccgtgtaactggggatgtcaatcatctggagttacacctcctcccgtactccacc
taccgcttccgggtcagcggggtcaacagactggggaggagcgacccgtcagaaatctct
gaggcctacagcacccaacccacagttcctgaaagttaccctctaaatgtgcgtagtgag
tctacagaaccaggaacactggtcatcatgtgggaggagattgaccgtcgtttgcacaac
gggtcggggttccagtataaggtgtcatggcgacaggttcaggagcatcactggagccat
acccatgttccacatcctccctacctggtgaacggaaccagagcgttctctagttatgag
atgaaggtccaggctgtcaactctctgggagaggggccacatcctgttcccgttatagga
cactctggagaggactacccgctggcctctccatctaaaatcagtgtgtcagtagataac
agctcagccattgtaaggtggcagccggttgacacacacacggtccagggtcacctgctg
ggttataagatatatctgaagaggttgggttcccagggaggaggagagcatagagttatt
ggacgcagagaggtgagagagattaagggaggagtggagcgaggaacggagagaaaggag
gagaggtgggttgtggaggtgaacggcaacaagacaaaagatgtggtgacggggctcaaa
ctctattccctgtacgagctgtcaatgacaaccttcaacagaaagggggaggggcctcac
tcaccgacacaccccttcaggacaccggagggagttcctggtcctcctgcctctctggat
tttgagagtccgtcggagacagagttaacccttcactggaggccccccactcagcccaac
ggacaacttgtgggatatgttctacagtaccaacagatttcagacagccgaaacagtcct
cctcaggtagagatgatctatgaccccacggtgacccacttaccgttggaaggtctggac
cctcatagccgctacgtcttctacctgaggggacgcacatctgctggacagggaccacca
ataacaggggagtgtgccaccctgctggacggagtacctcccagtaacatcagtacagtg
ataggagaaaggtcagtcaacctgagctgggtccctggagacagatataggaaccacagc
ttccacatcaaatacctcagcaagactgttgggggtaagtgggaggagtcagaacaggtt
aacacgttgcaggcattctattcgcttacgggtcttcagcctggaacacagtaccgcctc
ctcatcacccatggcaactacacacactgggaggacgagatacagacaaccggtccagag
ctacgtggtgtggaaggtgattttgctactcaaggctggttcatagggctgatcagtgct
gtagtgttgctgttgttgctgcttctggttctctgtttcatcaagaggagtaaagggggc
aagtacgcagtgaaagacaaggaagagagtcagatggactccgaggctcggccaatcaaa
gacgagacgtttggagagtacagatctctggaaagtgatggtgatgagaagcggtcagtc
agtcagccatctctgtgtgtggagagtaaactggggagtgacgactcccttgctgaatac
ggagacagtgtcgacatccagttcaacgaggacggctctttcattggtcaatacagtggc
agagggcccgcccctacaggaaatgagagctctggccccgcctcccctgtcaatctagac
ccaccgcctcctccgataggcccctccttcgccggaatactggacaggaccagttaa
DBGET
integrated database retrieval system
