Oncorhynchus keta (chum salmon): 118379385
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Entry
118379385 CDS
T09424
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118379385 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118379385 (pitx2)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118379385 (pitx2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
118379385
NCBI-ProteinID:
XP_035622312
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All DBs
Position
4:58511123..58591435
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AA seq
319 aa
AA seq
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MNSMKDPLNLDHHHHHHLTGTKLSSTHHTALAMASSLQPLQRSVDSKHRLEVHTVSDTSS
PESVEKDSKGQSKTDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYEDMYPSYTYNN
WAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSSVTGVPGSS
LNSLNNLNNLSNPSLNSGVPTPTCPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYTS
VQNPGSNLSACQYAVDRPV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccattgaatttggaccatcatcaccaccaccacctaaccggg
actaaactctcctccacgcaccacacggcactagcaatggcctctagtctgcagccgttg
cagcggtctgtggactccaaacaccggttagaggtgcacacagtatcagacacctccagt
ccggagtccgtagagaaagactcaaagggccagagcaaaactgacgactcttcagatgat
ccttctaaaaagaagcgacagcggcgacagaggactcacttcacaagccagcagctacag
gaactggaggccacgttccagaggaatcgctatccggacatgtctacaagagaggagata
gccgtgtggaccaacctcacagaggcccgcgtcagggtgtggttcaagaaccggcgagca
aaatggaggaaaagggaaagaaaccagcaagccgagctatgcaagaacggcttcggtcct
cagttcaatggacttatgcagccctatgaagacatgtaccccagctacacatacaacaac
tgggccgccaaagggctaacttcggcctccttgtccaccaaaagcttcccttttttcaat
tccatgaacgtcaaccctttgtcatcgcagacgatgttctccccgcccaactccatctct
tcaatgagcatgacttccagtatggtgccgtcctcggttactggcgtgcccggttcgagc
ctcaacagcctcaataatttaaacaaccttagcaacccctctctgaattcgggagttccc
acgccaacctgcccgtacgctccgccgacccctccttatgtgtacagggacacttgtaac
tccagtctggcaagcctgagactgaaagccaagcagcactcgagttttggatacaccagt
gttcagaatccaggctcaaatctgagcgcgtgccagtacgccgtggatagaccagtgtaa
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