Oncorhynchus keta (chum salmon): 118379459
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Entry
118379459 CDS
T09424
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118379459
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
118379459
NCBI-ProteinID:
XP_052340658
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All DBs
Position
28:7819971..7859112
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AA seq
818 aa
AA seq
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MGILTHCVLLFLFQHLTSAYAFKEGLDNGQYAFVKDPSLNIEKRSADVELFQFDSESPEH
IRNRRSADQEDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQIPF
FMLRFAQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLGS
RIFISRDFGNSFEQQDLPFNPLMQITYNPRDAKVLLVISNTNELWLSEDFGENWRKIHDM
VCLFKWGMDSNIFFTTSLNGSCNDLGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFAS
VMTGTGTLRRIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTAYGTI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTKVTSLRGVFITSILAEDGLVQSVVSFDQGGE
WVPLQKPANTKCDSTAKDPDKCSLHIHAAYSAAMKLNVPMLPLSEPNAVGLIMAHGSVGD
AISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDIKFSTDEGQC
WHVHQFTSDPIHFTGLAVEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEDQD
YVQWLAHSDDISDPNDGCMLGYKEKFLRLRKASVCWNGRDYEVDKQPAPCLCTLDDFLCD
FGYYRKENSSECVEQLDLKDHLLEFCLQGKEELLQTRGYRKIPGDKCEGGKQPERKEIDL
SKRCVGDLLGPQELLMHGHLSSSAPIIVTVLIIVLLAIIAGVLIVKKYVCGGRFLVHSYS
VLQQHAEAQGLDEPLDSSYTQTRNMADFHDDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgcactgtgttttactttttttattccagcatttgacgtccgcttat
gcttttaaagaaggactagacaacggacagtatgcatttgtgaaagatcctagtttgaat
atcgaaaagagatctgcagatgtagaattattccagtttgactctgaatcacccgaacac
attcggaacaggagaagcgctgatcaagaggactgtaaaagtctccagggattcgacacc
aaattgacgaacaacacccacacctattccttcaatgacctgagtgggtccgtgtcactg
gcctgggttggagacgccaccggggtcatcctggctttgacaacattccagattccattc
ttcatgttgagattcgcccagtccaaactctatcgaagtgagaactatgggaagtcgttc
caggatgttacaaacctcatcaacaacactttcatcaggacagagttcggcatcgccatc
ggaccagagaactctgggaaggtgatcctgacaggtgacgtgtctggcagcctgggatct
cgtatctttatctccagagactttgggaacagctttgagcagcaggaccttcctttcaac
cccctgatgcagatcacatacaaccccagagatgccaaagttctcctggttatcagcaac
actaacgagctctggctgtcagaggactttggagagaactggaggaagatccatgacatg
gtgtgtctgttcaaatgggggatggacagtaacatattcttcaccaccagcctcaatgga
tcctgcaatgacttggggatgctggacttgaggaggacgacggactacgggaagaccatc
aagactgttgccactaagatcttctctttcggcctggggggaaagtttctgtttgcctct
gttatgactggaactggcactctgaggaggatccatgtgtcgactaaccagggggaggag
tggaacatggctcagctgcctccggttggccacgaggagttctattctatcctggcagcc
aatgaggacatggtgttcatgcacgtggacgaaccaggagacacagcctatggcaccatc
tacgtgtcagacgacaggggtaccgtgtactctaagtctctggagcgtcacctctacacc
accacagggggagacactgacttcaccaaagttacctctctacgaggggtcttcatcacc
agtatactggcagaggatggcttggtgcagtccgtggtgtccttcgaccagggaggggaa
tgggtgcccctgcagaaacctgccaacaccaagtgtgactccacagccaaagaccccgac
aagtgcagtctccacatccacgcagcttacagtgcggctatgaagctgaacgtccccatg
ctgcctctcagtgaaccaaacgctgtaggactcatcatggctcacgggagtgtgggcgat
gccatctctgtgatgaagcctgacgtgttcgtgtcagatgatggaggttacacctggctg
caggccctggagggacctcaccactatgccatcctggactctggtggactcctggtggcc
gtggagcactctgctcagctcatcaaagacatcaagttttccacagacgagggccagtgc
tggcacgttcaccagttcaccagcgatcccatccacttcacagggctagcggtggagccg
ggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtac
tgggtatctgtcaccgttgacttccgagagctgctcactagaacctgtgaggaccaggac
tacgtgcagtggctggcacactctgatgacatcagcgaccctaacgacggctgtatgctg
ggttacaaggagaagttcctgcgtctgaggaaggcctcggtctgctggaacggacgggac
tatgaggtcgacaagcaacccgccccctgcctctgcaccctggacgactttctgtgtgac
tttgggtactatcgtaaagagaacagctctgagtgtgtggagcagctggacctgaaggac
caccttctggagttctgtctgcaaggcaaggaggagctgctgcagaccagaggctatagg
aagatccccggggataagtgtgagggaggaaaacagccggagagaaaagagatcgacctc
agtaagaggtgtgtcggtgatctgctgggacctcaggaactactgatgcacggccatctg
tccagctctgcacccatcatagtgactgttttaatcattgtgctgctcgcaatcatagct
ggggtcctcatcgtcaagaagtatgtctgcggtggcaggttcctggtacacagctactct
gtcctacagcagcatgctgaggcccagggactagacgaacccctagacagcagctacact
cagaccagaaacatggccgacttccacgacgattcagacgaggatcttctggagtaa
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