Oncorhynchus keta (chum salmon): 118379479
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Entry
118379479 CDS
T09424
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03020
RNA polymerase
oke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118379479 (polr2g)
09124 Replication and repair
03420 Nucleotide excision repair
118379479 (polr2g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118379479 (polr2g)
03019 Messenger RNA biogenesis [BR:
oke03019
]
118379479 (polr2g)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118379479 (polr2g)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
118379479 (polr2g)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118379479 (polr2g)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118379479 (polr2g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
118379479
NCBI-ProteinID:
XP_035622388
LinkDB
All DBs
Position
30:6800710..6804856
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AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatttccctggagcatgagatcctgctccaccctcggtactttggtccc
aatctcctgaacactgtgaaacagaagctcttcacagaagtggagggaacatgcacagga
aaatatgggtttgtcattgcggtgaccaccattgataacattggtgcaggtgtcatccaa
ccaggcaggggatttgtgctttacccagtcaagtacaaggctatcgttttccgtccattc
aaaggcgaggtggtagatgccgtggttacccaggtcaacaaggttggccttttcacagag
atcggccccatgtcctgtttcatctctcgtcactccattccctcagagatggagtttgac
cccaactcaaatcctccctgttataagaccactgatgaggacattgtaatccaacaggat
gatgagattcggttgaaaatcgtgggaacaagagtggataaaaacgacatatttgccatt
ggatccctcatggacgattacctgggtcttgtcagctga
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