KEGG   Oncorhynchus keta (chum salmon): 118379527
Entry
118379527         CDS       T09424                                 
Name
(RefSeq) integrin alpha-1-like isoform X1
  KO
K06480  integrin alpha 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
oke04810  Regulation of actin cytoskeleton
oke04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118379527
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118379527
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118379527
   04810 Regulation of actin cytoskeleton
    118379527
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118379527
   04515 Cell adhesion molecules [BR:oke04515]
    118379527
   04090 CD molecules [BR:oke04090]
    118379527
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118379527
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin alpha subunits
   118379527
CD molecules [BR:oke04090]
 Proteins
  118379527
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 Integrin_A_Ig_1 FG-GAP_3 VWA_2 FG-GAP_2 Cupin_7
Other DBs
NCBI-GeneID: 118379527
NCBI-ProteinID: XP_052314315
LinkDB
Position
12:42925866..43018029
AA seq 988 aa
MFQVGIVSYGEKVTHNVNLSQFDTTQSLLAKVAKLPQQTGFKTMTALGIDTARKEAFTVE
RGARPGVKKVMIIVTDGESHDFYNLDKVIKECEEDDVERFGIAVLGDYNRNNRSIKEVKK
FIEEIQSISSDPVGDHFFNVSDEFALLNIVDALGSRIFALEATSGNYTSSFEMEMSQAGF
SAHTSKEGVMLGAVGAYEWNGTVVMHTNQGTVVPLNADFQDPLDEKKESLAEYVGYAVQS
ASTPNGELYITGAPRYNHTGRVIVYKLDGEIITVTQVLKGEQIGSYFGSVLQTVDVDQDS
YTDILLVGAPMFMGPEREEQGQVYVYKLNEKGLFEHQTTLKPDNQTCCTSAHSNGCTIVN
TNGPCGARFGTAIAEVSDLDLDGNRDVAIGAPLENDHKGAVYVYHGAKKTIKEKYVQRIP
GPGDGVKTKFFGQSIHGVMDLNGDGIIDITIGGLGGASLFWSKDVAELYANMTFDPNKIN
LQQPSEDCVLGERATVCVKTRVCFSYSVKSEKDHTNLGTAIKYNLTLDSLRAKSRAAFVN
PDEKSERKIQVTANIIDALCLEHSFAMKANLDFRDPIMISLEFGLAEDTGPVLDGDLPTS
LNKTIPLVDCGSDDKCIADLSLKAVPSIQSLVIKANKEKFHVLITIRNSQDNAYNTKVML
SFTENINYVKVKANDKVCSLNNTKVECAVGYPFLKSNVEEVFEILFEVNPAHVWKEIQIN
VTATSDSEELKTTLHDNSVRISIPVKYEAGLRFTADRHMKEDHIIVKEGEQYPSIFNHTS
VIGEEVKIIYTVKKDVNMETPPLKLRVMYPYLSPRENILLYLTHVTSSQDVRCHIRDLIN
PLKINNNNTHTINPKKETLSVFLVGCKDHPCKSFICSIPHVNNSQVNVTFRVWKPTFIKA
EFSSLHMIVNATLENLNTDLFVLSATNYARDVKIQISKEALGGIPLWIIIVSILIGLLIL
ALVIFALWKAGFFKRKSIEDMENEDMKN
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgttccaggtgggcattgtgtcgtatggagagaaagtcactcacaatgtcaacctcagc
cagtttgataccactcaatccctcctggccaaagtggcgaaacttccccagcaaacaggt
ttcaagaccatgaccgccctgggaattgacacggcaaggaaagaggccttcactgtggag
cgaggggcgcggccgggggtgaagaaggtcatgataattgtgacggacggagagtcacat
gacttttataacctcgacaaggtcatcaaagaatgtgaggaggacgatgtcgagaggttc
ggtatcgctgtgcttggtgattacaacaggaacaacagaagcatcaaggaggtgaagaaa
ttcattgaggagatccagtcgatctccagcgatcctgtgggagatcacttcttcaacgtg
tcggatgagtttgccttgctgaacatcgtagacgccctgggcagcaggatctttgccttg
gaggcaacgtcaggtaactacacctcgtcttttgagatggagatgtcccaggctggattt
agtgcccacacctctaaagagggtgtgatgctgggtgctgtgggggcgtatgagtggaac
gggacagtagtgatgcataccaaccagggtaccgtggttcctctaaacgcagacttccaa
gaccccctggatgaaaagaaggagagcctggcggagtacgtgggttatgccgtacagtca
gcatcaacccctaatggtgaattatacatcacaggagcaccgcggtacaaccacacaggc
agagtcatcgtctacaaactggatggggaaatcatcacagtcacacaagtactgaaagga
gagcagattggctcctactttggcagcgtgctccagacggtggatgttgaccaggactcc
tacacagacatcctgctggtgggagctcctatgttcatgggcccagagagggaggaacag
ggacaggtgtacgtctacaaactcaatgagaagggcctatttgagcaccagaccacgctg
aagccagacaaccagacgtgttgtacctcggcccactccaacggttgcaccatcgtcaac
accaacggcccgtgtggcgcccgcttcggcaccgccatcgcagaggtcagtgacctagac
ctggacgggaaccgggacgtggccatcggggcgccactggagaacgaccacaaaggggca
gtctacgtctaccatggagccaagaagaccatcaaggaaaaatatgtgcagcgtatccca
ggccctggagacggggtgaagactaagttctttggccagtcgatccacggagtcatggat
ctgaacggagacggaattatagacattaccatcggagggctgggaggggcttctctgttc
tggtccaaggatgttgctgagctttatgccaacatgacctttgacccaaacaagatcaac
ctacagcagccctctgaagactgtgtgctgggtgagagagccaccgtgtgtgtgaagacc
agggtctgctttagctacagtgtcaagtctgagaaggaccacactaacttgggaacagcc
attaagtacaacctgactctggactctctgagggcaaagtcgagggcagcgtttgtcaac
cctgacgagaagagtgagaggaagatccaggtcaccgccaacatcatagacgctctgtgt
ctggaacattcctttgccatgaaggctaatctggacttcagagaccccatcatgatctcc
ctcgagtttggtctggctgaggacacaggccccgtcctggatggagacttaccaacgtca
ctcaataaaacgattcctttggtggactgtgggagcgatgacaagtgcatagctgaccta
tccctgaaggctgtgccaagtatacaaagtcttgtgatcaaagccaacaaggaaaagttc
catgtgctcattaccattagaaacagtcaagacaatgcctacaataccaaagtcatgctc
agctttactgaaaacataaactacgtcaaagtcaaggccaatgacaaagtctgcagtctg
aataataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggag
gtgtttgagatcctgtttgaagtcaaccctgcacacgtctggaaagagattcagatcaac
gtaactgcaaccagtgacagtgaggaattgaagaccaccctccatgacaactctgtgaga
atctccatccctgtgaagtacgaggctggactcagattcactgctgacaggcatatgaag
gaggaccacataatagtgaaagagggagaacagtaccccagcatcttcaaccacaccagt
gtgataggagaagaggtcaagatcatctatacggttaaaaaggatgtgaatatggagact
cctcctctaaagctgagggtgatgtacccgtacctatcacctagagagaacatcctgcta
tacctgacacatgtcacctcctcacaggatgtgagatgtcacatcagggatctgattaac
cctttaaagatcaacaacaacaacacgcacaccatcaatcctaaaaaagagaccctcagt
gtcttcctggtgggctgtaaggaccacccgtgtaagtcatttatctgctccatccctcac
gtcaacaacagccaggtcaatgttaccttcagggtgtggaagcccacctttatcaaagca
gagttctccagccttcacatgattgttaatgccactctggagaacctgaacactgatctc
ttcgtgttgagtgccaccaattacgccagagatgtgaagatccagatctctaaagaggct
ttgggaggtataccactgtggatcattatagtcagtatcctcataggactgctgattctg
gcactggtcatcttcgctctatggaaggctggatttttcaagagaaaatccatagaggac
atggagaacgaggacatgaagaattaa

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