Oncorhynchus keta (chum salmon): 118379527
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Entry
118379527 CDS
T09424
Name
(RefSeq) integrin alpha-1-like isoform X1
KO
K06480
integrin alpha 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118379527
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118379527
09142 Cell motility
04820 Cytoskeleton in muscle cells
118379527
04810 Regulation of actin cytoskeleton
118379527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118379527
04515 Cell adhesion molecules [BR:
oke04515
]
118379527
04090 CD molecules [BR:
oke04090
]
118379527
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118379527
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin alpha subunits
118379527
CD molecules [BR:
oke04090
]
Proteins
118379527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
VWA_2
FG-GAP_2
Cupin_7
Motif
Other DBs
NCBI-GeneID:
118379527
NCBI-ProteinID:
XP_052314315
LinkDB
All DBs
Position
12:42925866..43018029
Genome browser
AA seq
988 aa
AA seq
DB search
MFQVGIVSYGEKVTHNVNLSQFDTTQSLLAKVAKLPQQTGFKTMTALGIDTARKEAFTVE
RGARPGVKKVMIIVTDGESHDFYNLDKVIKECEEDDVERFGIAVLGDYNRNNRSIKEVKK
FIEEIQSISSDPVGDHFFNVSDEFALLNIVDALGSRIFALEATSGNYTSSFEMEMSQAGF
SAHTSKEGVMLGAVGAYEWNGTVVMHTNQGTVVPLNADFQDPLDEKKESLAEYVGYAVQS
ASTPNGELYITGAPRYNHTGRVIVYKLDGEIITVTQVLKGEQIGSYFGSVLQTVDVDQDS
YTDILLVGAPMFMGPEREEQGQVYVYKLNEKGLFEHQTTLKPDNQTCCTSAHSNGCTIVN
TNGPCGARFGTAIAEVSDLDLDGNRDVAIGAPLENDHKGAVYVYHGAKKTIKEKYVQRIP
GPGDGVKTKFFGQSIHGVMDLNGDGIIDITIGGLGGASLFWSKDVAELYANMTFDPNKIN
LQQPSEDCVLGERATVCVKTRVCFSYSVKSEKDHTNLGTAIKYNLTLDSLRAKSRAAFVN
PDEKSERKIQVTANIIDALCLEHSFAMKANLDFRDPIMISLEFGLAEDTGPVLDGDLPTS
LNKTIPLVDCGSDDKCIADLSLKAVPSIQSLVIKANKEKFHVLITIRNSQDNAYNTKVML
SFTENINYVKVKANDKVCSLNNTKVECAVGYPFLKSNVEEVFEILFEVNPAHVWKEIQIN
VTATSDSEELKTTLHDNSVRISIPVKYEAGLRFTADRHMKEDHIIVKEGEQYPSIFNHTS
VIGEEVKIIYTVKKDVNMETPPLKLRVMYPYLSPRENILLYLTHVTSSQDVRCHIRDLIN
PLKINNNNTHTINPKKETLSVFLVGCKDHPCKSFICSIPHVNNSQVNVTFRVWKPTFIKA
EFSSLHMIVNATLENLNTDLFVLSATNYARDVKIQISKEALGGIPLWIIIVSILIGLLIL
ALVIFALWKAGFFKRKSIEDMENEDMKN
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggtgggcattgtgtcgtatggagagaaagtcactcacaatgtcaacctcagc
cagtttgataccactcaatccctcctggccaaagtggcgaaacttccccagcaaacaggt
ttcaagaccatgaccgccctgggaattgacacggcaaggaaagaggccttcactgtggag
cgaggggcgcggccgggggtgaagaaggtcatgataattgtgacggacggagagtcacat
gacttttataacctcgacaaggtcatcaaagaatgtgaggaggacgatgtcgagaggttc
ggtatcgctgtgcttggtgattacaacaggaacaacagaagcatcaaggaggtgaagaaa
ttcattgaggagatccagtcgatctccagcgatcctgtgggagatcacttcttcaacgtg
tcggatgagtttgccttgctgaacatcgtagacgccctgggcagcaggatctttgccttg
gaggcaacgtcaggtaactacacctcgtcttttgagatggagatgtcccaggctggattt
agtgcccacacctctaaagagggtgtgatgctgggtgctgtgggggcgtatgagtggaac
gggacagtagtgatgcataccaaccagggtaccgtggttcctctaaacgcagacttccaa
gaccccctggatgaaaagaaggagagcctggcggagtacgtgggttatgccgtacagtca
gcatcaacccctaatggtgaattatacatcacaggagcaccgcggtacaaccacacaggc
agagtcatcgtctacaaactggatggggaaatcatcacagtcacacaagtactgaaagga
gagcagattggctcctactttggcagcgtgctccagacggtggatgttgaccaggactcc
tacacagacatcctgctggtgggagctcctatgttcatgggcccagagagggaggaacag
ggacaggtgtacgtctacaaactcaatgagaagggcctatttgagcaccagaccacgctg
aagccagacaaccagacgtgttgtacctcggcccactccaacggttgcaccatcgtcaac
accaacggcccgtgtggcgcccgcttcggcaccgccatcgcagaggtcagtgacctagac
ctggacgggaaccgggacgtggccatcggggcgccactggagaacgaccacaaaggggca
gtctacgtctaccatggagccaagaagaccatcaaggaaaaatatgtgcagcgtatccca
ggccctggagacggggtgaagactaagttctttggccagtcgatccacggagtcatggat
ctgaacggagacggaattatagacattaccatcggagggctgggaggggcttctctgttc
tggtccaaggatgttgctgagctttatgccaacatgacctttgacccaaacaagatcaac
ctacagcagccctctgaagactgtgtgctgggtgagagagccaccgtgtgtgtgaagacc
agggtctgctttagctacagtgtcaagtctgagaaggaccacactaacttgggaacagcc
attaagtacaacctgactctggactctctgagggcaaagtcgagggcagcgtttgtcaac
cctgacgagaagagtgagaggaagatccaggtcaccgccaacatcatagacgctctgtgt
ctggaacattcctttgccatgaaggctaatctggacttcagagaccccatcatgatctcc
ctcgagtttggtctggctgaggacacaggccccgtcctggatggagacttaccaacgtca
ctcaataaaacgattcctttggtggactgtgggagcgatgacaagtgcatagctgaccta
tccctgaaggctgtgccaagtatacaaagtcttgtgatcaaagccaacaaggaaaagttc
catgtgctcattaccattagaaacagtcaagacaatgcctacaataccaaagtcatgctc
agctttactgaaaacataaactacgtcaaagtcaaggccaatgacaaagtctgcagtctg
aataataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggag
gtgtttgagatcctgtttgaagtcaaccctgcacacgtctggaaagagattcagatcaac
gtaactgcaaccagtgacagtgaggaattgaagaccaccctccatgacaactctgtgaga
atctccatccctgtgaagtacgaggctggactcagattcactgctgacaggcatatgaag
gaggaccacataatagtgaaagagggagaacagtaccccagcatcttcaaccacaccagt
gtgataggagaagaggtcaagatcatctatacggttaaaaaggatgtgaatatggagact
cctcctctaaagctgagggtgatgtacccgtacctatcacctagagagaacatcctgcta
tacctgacacatgtcacctcctcacaggatgtgagatgtcacatcagggatctgattaac
cctttaaagatcaacaacaacaacacgcacaccatcaatcctaaaaaagagaccctcagt
gtcttcctggtgggctgtaaggaccacccgtgtaagtcatttatctgctccatccctcac
gtcaacaacagccaggtcaatgttaccttcagggtgtggaagcccacctttatcaaagca
gagttctccagccttcacatgattgttaatgccactctggagaacctgaacactgatctc
ttcgtgttgagtgccaccaattacgccagagatgtgaagatccagatctctaaagaggct
ttgggaggtataccactgtggatcattatagtcagtatcctcataggactgctgattctg
gcactggtcatcttcgctctatggaaggctggatttttcaagagaaaatccatagaggac
atggagaacgaggacatgaagaattaa
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