Oncorhynchus keta (chum salmon): 118379635
Help
Entry
118379635 CDS
T09424
Symbol
amph
Name
(RefSeq) amphiphysin isoform X1
KO
K12562
amphiphysin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118379635 (amph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118379635 (amph)
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
118379635 (amph)
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
118379635 (amph)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
118379635 (amph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
HD_3
Arfaptin
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
118379635
NCBI-ProteinID:
XP_052333277
LinkDB
All DBs
Position
23:45277744..45422464
Genome browser
AA seq
798 aa
AA seq
DB search
MAEIKTGIFAKNVQKRLSRAQEKVLQKLGKADETKDDHFDQAVQNFKRQETEGSRLQREM
KAYLAAVKAMQQASMNLTESLHEVYEPDWHGKDDVLSIGKNCDVLWEDFHQKLVDSSLIT
LDTYLQQFPDLKIRVAKRSRKLIDYDSARHHLETIQAVVNRSDRKVSKAEDELKKAQKVF
DELNVDLQDELPTLWDSRVGFYVNTFKNVTNLEAKFHREISVLCKQLYEVMTKLGEQHSD
KMFTIQGAPSDSGPLRLSRAPSPPDSDSDESPVDTPNHMLAPASPGPPRPKSPSGQFKKG
PPVPPPPKTPTKELHQEQIIDLFGGQFLPVATPSQPNERPGESLLDLDFDPFQPDGNTTI
GQAAPPITQQLPWDLWTGNAEPVQPMDSGSMSTVGVEEDGGGGGEAPNTADFNPGFPAFP
EQAGDPSFATDWAADFGSAPAKGDSVPSATEAATSEVPATTGQDEAQGWPAADGWGGEAG
EAAAAEQPQGAETAAAGDEVTNNAFNGFPQMEATAPTFVADFDKLNESNVTMDPEAAAPP
AETAVAREATAETAVAREATAETAVAPEVLGTETSDATEAAAEAGEIQEPASPTSEAEAA
ESATSPGEEKPDSTVGSPVTSAEPEGASPTEILPVEEAEKAFPSETAPPESVPTPEEMKE
SPVEETPEKMPIPSVVIEPASSNEGDDDRDIIDISPTTISNNGVTADTQTAKDITTSDGP
PGLPPGFLYKVETLHDFEAANSDELELKKGDVVLVVPTATAEDQDAGWLTGIKESEWSHL
GASAHKGLFPENFTQRLE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaataaagacggggattttcgccaaaaacgtgcagaaacggctaagcagggcg
caggaaaaggtactgcagaaactgggaaaggcggatgagacgaaagatgaccattttgat
caagccgtccagaacttcaagcgacaggagacggagggctcccggctgcagagggagatg
aaggcatatctggcggcagtgaaagcaatgcaacaggcttccatgaacctgacagagtcc
ctacatgaagtctacgagccggactggcacgggaaggacgatgtcttgagcatcgggaag
aactgtgatgtcttatgggaggacttccatcagaagctggttgattcatcacttatcaca
ctggacacgtacctgcaacagttccccgacctcaagatccgtgtggcgaaaagaagcaga
aagctaattgactacgatagtgcacggcaccatctggagaccattcaggcggtggtcaat
agaagtgatcggaaggtctccaaggcagaggacgagttgaaaaaagcccagaaggtgttt
gatgagctcaatgttgatctgcaggacgagctaccaactctctgggacagccgagttggt
ttttacgtgaacacattcaagaacgtgacgaacctggaggccaaattccaccgggaaatc
tctgtgctctgtaagcagctgtatgaagtgatgaccaagctgggagagcaacactctgac
aaaatgttcaccatacagggagcgcccagtgattcaggacctttgcgactctctcgggcc
ccttcgccaccggacagcgacagtgacgagagcccagtggacactcctaaccacatgctg
gcgccagcctctcccggcccgccccggcccaaatctccttcaggccagttcaaaaaggga
ccaccggtgcccccgccacccaagaccccgaccaaggagctgcaccaggagcagataatc
gacctgtttgggggccagttcttacccgtggccacgccctcgcagccaaatgaaagaccc
ggagaatctctcctggatctggactttgatccattccagcctgacggcaacaccactatc
ggacaggctgcaccacccataacacagcaactaccctgggatttgtggacaggaaatgct
gaacctgtgcagcctatggattctgggtctatgagtactgtgggtgtggaggaggatggg
ggcggcggtggcgaggccccgaacactgccgactttaaccctgggttccccgcattcccc
gagcaggcgggagaccccagcttcgccaccgactgggctgctgacttcggctcggccccg
gcaaaaggagactctgtcccgtctgccaccgaggcggcaaccagcgaggttccagcgacc
acagggcaggacgaggcccaaggctggcctgcagcggacggctggggcggggaggcaggg
gaggcagcagcagcagagcagccacagggggccgaaacggccgcagctggagacgaggtg
accaacaatgcatttaacggatttccccagatggaagcaacagccccaacatttgttgcg
gattttgataagctgaatgaaagcaatgtcaccatggaccctgaagctgctgcgccccca
gctgagactgctgtggcccgggaggcaacagctgagactgctgtggcccgggaggcaaca
gctgagactgctgtggccccggaggtccttgggactgagacctcagatgccacagaggca
gcggccgaggcaggggagatccaggagcctgcttccccgactagtgaggccgaggcagcc
gagagtgccaccagccctggagaggagaagcctgattccactgtggggtctccagtgaca
tctgcagagcctgagggggcttcaccaactgagatcctcccagttgaagaggctgaaaaa
gcattccccagcgaaacagctcccccggaatccgttccgaccccggaggaaatgaaggag
tcccctgtggaggagactccggagaagatgcctattccctcagtggtgattgagccagcc
tccagcaacgaaggtgacgatgaccgcgacattattgacatttccccaacgaccatcagc
aacaacggagtgacagcggacacccagacggccaaagacatcaccacctccgacggccca
ccaggactccctcctggcttcctttacaaggtggagactctgcatgactttgaagctgca
aactcagacgagctggagctgaagaaaggtgacgtggttctggttgttcccacggctaca
gcagaagatcaggatgcgggttggcttacaggtatcaaggaaagcgaatggtcgcacctt
ggggccagtgcccacaaaggactcttcccagaaaacttcacacagcgcttggagtaa
DBGET
integrated database retrieval system