Oncorhynchus keta (chum salmon): 118379845
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Entry
118379845 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118379845
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118379845
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
C19orf12
Motif
Other DBs
NCBI-GeneID:
118379845
NCBI-ProteinID:
XP_052376305
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Position
6:5535720..5676622
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AA seq
876 aa
AA seq
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MSQLYYRRTDSSSYRDRIPLRIVRSESELSSLEKAYLGTVEKGDYGSVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
SSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVAVPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWGGKFLTCVFLSLLFPVFSLCYLIAPKSRYGLFIR
QPFIKFICHTASYLTFLFLLLLASQHIVTTEPDRQGPAPTTVEWMILPWVLGFIWTEIKQ
MWDGGXADYIHDWWNLMDFVMNSLYLATISLKIVAYTRYSGCKPRNQWEMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETKAADENGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTEFVG
ATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPF
NIVPSPKSVWYLVCWTKRHVCKMPHSKPTDTFGTLGTRAAENLRRNRQYQEVLRNLVKRY
VAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPGLGGPGGVVGGGSGGSGV
GGGQSSLAYADRSLKVPTTPPTSIGQLKNNKKTLFTVTASIIQQGGATASSPRLPDALAF
NGLRLANGLAPARRWWFLCKLQRQAGSEERLPQGHH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctgtactaccggcggacagacagctcttcgtaccgggaccgtatccctctg
cggatcgtccggtctgagtcggagctgtcttccctggagaaggcctatctgggaaccgtg
gagaagggagactacggcagcgtcaaacaggctctggaggaggccgagatctacttcaag
atcaacattaactgtatagacccgttaggccgcacagctctgctgatcgccatagagaat
gagaacctggagatcatagaactactgctgagctttaacgtgtatgtcggagatgcactg
ctgcacgccatccgcaaagaggtggtgggggccgtggaactgcttctcaaccacaagaaa
tccagcggaggcatgcaggttcctccgatcctattggacaagcagttctccgacttcact
cctgacatcacccccatcattctggcagctcacaccaacaactatgagatcatcaaacta
ctggtgcagaaaggagtggctgttccacaaccacacgaggtgcgttgtaactgtgtggag
tgtgtgtccagctcggatgtggacagccttcgccactcccgatcccgtctcaacatctac
cgagccctgtccagcccttccctcatcgccctgtccagtgaagaccccttcctcacagca
ttcagactgagctgggaactacaggagcttagcaaggtggagaatgagtttaagtcggag
tatgaggagttatcccaacagtgtaagcagtttgctaaagaccttctggatcagaccagg
agctccagagagctggagatgatcctgaactacagagacgacatcaacctgctggaggag
gagggaaacaacgacctggctagactcaaactggctattaaataccaccagaaagagttt
gtagcacagcccaattgtcagcagctgctggcgtctcgctggtacgatgagttcccaggc
tggagacgtcgtcactggggagggaagttcctcacctgtgtcttcctcagcctcctcttc
cctgtcttctccctctgctacctcatagccccgaagagccgctatggacttttcatcagg
caacccttcatcaagtttatctgccacacagcctcctacctcacctttttgttcctgctc
ctgctggcatcacagcatatagtgactacagaaccggacagacaggggccagcacctact
actgtagaatggatgatactgccttgggtactgggttttatctggacagagatcaagcag
atgtgggatggagggnttgcagactatatccatgactggtggaacctcatggacttcgta
atgaactctctgtacctggcgaccatatcactgaagatagtggcctataccaggtacagt
ggctgtaagcccaggaaccagtgggagatgtggcatcccaccctggtagctgaggctgtg
tttgccattgccaacatcttcagttcccttcgtctcatctccctgttcacagctaactcc
cacctgggacctttacagatctccctgggacgcatgctgctggacatcctcaagttcctc
ttcatctactgtctggtgttgctggcgttcgccaacggtctgaaccaactctacttctac
tacgagacaaaggccgcagacgagaatggcaagtgtaaaggcatccgctgtgtcgagcag
aacaacgctttctccacgttgtttgagactctccaatctctgttctggtcgatcttcggt
ctgatcagtctgtacgtgactaacgtagatgcggaccatcagtttacagagtttgtaggg
gccaccatgtttggaacctataatataatctccctggtggttctactgaacatgctgatc
gccatgatgaacaattcctatcaacacatcgctgaccacgcagacattgagtggaagttt
gcaaggaccaagctgtggatgagttactttgaggaggggggtactctaccttctcccttc
aatatcgtacccagccccaagtcagtgtggtacctggtgtgttggaccaagagacatgtc
tgtaagatgccccactccaaaccaactgacaccttcggtaccttggggacgagagcagca
gagaacctgaggagaaaccgccagtaccaggaggtgttgaggaacctggtgaagcgatat
gtagcagccatgatcagagatgctaaaacagaggaggggttgactgaggagaactttaag
gagctgaagcaggacatctctagtttccgttacgaggtgatggggatgatgaagacaggt
aaacctggtctgggaggtccggggggtgttgttggggggggttcgggggggtctggggtt
ggtggagggcagtcctccctagcctatgccgaccggtcccttaaggtccccaccaccccc
cccacatccattggccagctgaagaacaacaagaagacactgttcaccgtaaccgcctcc
atcatccagcagggcggcgccacagcctcctctcctcggctcccagacgcacttgccttc
aacgggctgaggctggctaacggcctggcccctgcccgccgatggtggttcctctgcaag
ctccagagacaagcagggtcggaggaaagacttccccagggacatcactga
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