Oncorhynchus keta (chum salmon): 118379852
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Entry
118379852 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118379852
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118379852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118379852
NCBI-ProteinID:
XP_052371441
LinkDB
All DBs
Position
Unknown
AA seq
3092 aa
AA seq
DB search
MTDPIMDFFDDPNLFVGGLDGLAEEGFPPGPSLVDELNLSAGFEPLQVEPMGAGKHPGMI
PTSMPSSTQQSMAYGQQMGHFPGMKAQNSMGQPFAGSEGVGGGGMIAAQHTQFHGRSIGQ
APQSNALFSNSSPMWGNQDQNGNLYHSVPQQQQQQLHQQQQQQLHNQQHHLRQQQPQQQH
HPCQQQLQQQQVQQLQQQHQLLNQRQQQHLHQQVVNPQSLPQQHHSFPFHQANQQPASHN
QQRTTGGTQFHSRAVPNSGVLATANVETPNASLAGTPPQQGGYQLVQGTQGAFPGVGPED
SSMSFSMQTCSPMAHTLSSCSVSSTTTYPPSQYSFPGQGQPGISSLSQPLSLAPVSMIPT
TTPLPSSVPELSLVGAGCAFSSAPGMTQHHQPKQVPVSQAEDECPFRALRCSRQTLGNYD
SSEMFGQAMSCYPSAVSQLVPDQHQPQNCGSNLEVTRPPASTTTTNGYVSLEVSMAGLQG
EVEAQGGGFEGLEAPDLLADELLPQLEAALSQHDHHDSNCSWTNGGDGERNGKGEEEEEM
KEEERISISMDYKIQPPKNKNANGSNSHTAARVLSPPMKSSSSSSSSSSYSSSLEKRAQR
RLVKEQGEQQQQLMEEAGEDKQQKANRIIHEAIAKARERGEKNIPRVMSPESFPSGSSSA
HRRERERERDRDRDRERGRGNKTRTKASKKARIVPSSKPKQKAKIGKIVIKFGGMKKKRE
TESSEEESDEERPPRRYFKDDDSTRRSNRQVKRKKYAEEGEARVSDEEVKVMVKTKKTST
AAARKEPAQQLFVENPSEEDAAVVDKIMSSRIVKNEVAPGVIVEVEEFFVKYKNYSYLHC
EWAVEQQLEKDKRIQQKIKRFKIKQAQRAHFFADMEEDSFNPDYVEVDRVLEVSYCEDKD
TGEQVVYYLVKWCSLPYEDSTWELKGDVDQSKIEEFELLQAARPDSRRMERPPASLWKKR
DQSREYRNSNVLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIWRVGIR
GPFLIIXPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYSRDTQGRVVRGAYK
FHALITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKALLTGTP
LQNTVEELFSLLHFLEPQSFPSENTFMLEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEK
KLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGVGQANVPNLVNTMMELRKCCNHPY
LIKGAEEKILEDFREVYSPVAFDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV
RCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT
AADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDK
AVLQSMSGRENSVPGGGPTQQQLSKKEIEDLLRKGAYGALMDDEDEGAKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTANGRNSLV
IDTPRVRKQTRPFSATKDELAELSEGESDNEDKPKLRRPHDRLNSYGRTECFRVEKNLLV
YGWGRWKDILLHGRFKKQLTERDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPSEDGQ
TKELQNHLGLSTPVPRGRKGKKMKTQSSTFDIQKAEWIRKHNPEHMLQDEGYKKHLKHHC
NKVLLRVRMLYYLKQEVMGSQSQKILDGVDSSEIKIWVPEPDSSELPALWWDNISDKCLL
LGVYKHGYEKYNTVRADPALCFLERVGRPDEKAIAAEQRANDFMDGDVDDPEYKPAPALL
KDDMEDDASSPGDLVVTDNPGEGAPVMMEGLGGGGGDAAYWPSSSVLTARLRRLITASQR
YTKSRQILHIHQTQHTTQVTPSLCPLPPTLNDTINPKMAAKIERQQRWTRREEADFYRVV
STFGVVFDPDLGRFDWTKFRAMARLHKKTDESLQKYLWAFTAMCRRVCRLPPREGDTAVD
PSLSIQPITEERASRTLYRVELLRQVREQVLRHPLLYERLPLCQLGSDLPVWWETGTHDR
DLLIGATKHGVSRTDYHILRDPELCFMAAQRNYSQNKGVQQPSQTPTPLLNPPYQASRDP
ALAESPVPTPALMEREDIPGAVPKEEPLSEGEERMERGGQMEGERWSPQPAPLTPTGIEE
KPDLGVVKGENESHMVAARTKPLTPNSATRKEKKANKISRREARRAASAASDSDSDGSSS
SSSSRSSSSSSSSSSSSSRSGSSSSSSSSCSSGSSSSSSSSSSSSVGSESEGEEGKTKVP
TVAIAKGFDEDSVASLSTTQDEMQDSHVTENGSNNSHHHPFQGGYMLAASYWPKDRVMIN
RLDSICQAVLKGKWPGARRSYEAGGAVASFYTTKLLDNAAAANNSSNLCSASASASEDPS
ASPQGSKVKKHVAGEKEFSVKMNEQEGGLKLTFQKQGPGQPLKRPLEPEEGPLSQQQYLT
RLHELQCASDTSLADFTKPQAASFPQASTGLAGQMKLNGGMDGQPVVKRRRGRRKNVEGV
DLLFMNRNRGPAVPESVPPAWGGMSQAGTGLSIASGQGNPLGARGPMDTESRVSVINLKD
GTRLAGDDAPRRRELELWLKEHPGFVADTGAFIPGVNKRQLEQFQQDGRPKQKRHRCRNP
NKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSG
YLPESMFDRILTGPIVPEEVSRRGRRPKSALAKAAATANQAAPSLGLNPLLANGLLSGMD
LSSLQAFQQNLQSLQSLQLTAGLMGLPTDANNLAAMFPMMLSGMAGLPNLLSMGGLLGKP
SQDATGGAEQRKRKKGSREGGGGEPSSASSKAPSSQSHGPSHTSDTKGERTEGQSRDGDG
RIPSVHSPSSSSATTSTTTPLSASAAQAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVS
TTQPPHSDSNSDHKPHKPTKTSKTATSKPLSPRRTPECQEEEGLGDKREESGEHKEENSG
PEGSGKAESSSSSESGSSSSSSDGSSDSSDED
NT seq
9279 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatcatggacttctttgacgaccccaacctgtttgtgggagggctggac
gggttggctgaggagggcttcccccctggaccctcgctggtggatgagctcaacctcagc
gcaggctttgagcctctacaggtggagccgatgggggcagggaaacaccccgggatgata
cccacctccatgccctcctccacccaacagagcatggcttatgggcagcagatggggcat
tttccgggcatgaaggcccagaactccatgggacagcccttcgctggctctgagggtgtg
ggtggtggagggatgatagcagcacagcatacccagttccatggacgctcaattggtcag
gcaccccaatccaacgcgttgttttccaacagcagccccatgtggggcaaccaggaccag
aacgggaacctctatcactcagtgccccagcaacaacaacaacaactacatcaacaacag
cagcagcaactccacaaccaacagcatcacctccgacagcaacagccacagcagcagcat
cacccctgtcaacaacaacttcagcaacaacaagtgcagcagttacagcagcaacaccag
cttctgaaccagcggcagcagcagcaccttcatcaacaggtagtgaaccctcagtctctg
ccccagcagcaccacagcttccccttccaccaggccaaccaacagccagcatcccacaac
cagcagcgtaccaccggggggacccagttccactccagggctgtgcctaactcaggggtt
ctggccacagctaatgtggaaacccccaatgcctcgctggctggaaccccaccacagcag
ggtggctaccagctggtgcaggggactcagggggcctttcctggggtagggccagaggac
tctagcatgtccttctccatgcagacctgctcccccatggctcacaccctgtcctcctgc
tcagtgagctccaccaccacctaccctccctcccagtactccttccctggccagggacaa
cctggcatctccagcctgagccagcctctctctttagccccagtgtccatgatccccacc
accactcccctgccctcctctgtgcctgaactctctctcgtgggagctggatgtgcgttt
tcgtctgctccagggatgactcagcatcatcagcccaaacaggtcccagtcagccaggct
gaggacgaatgtcccttccgggctctgcgctgctccaggcagaccttagggaactacgat
tcatctgagatgtttggccaggccatgagctgctaccccagtgcagtcagccagctcgtt
ccagaccagcaccagccccagaactgtggatctaacttggaagttaccagacctccggcc
agcaccactaccactaacggctacgtgtctctagaggttagcatggcagggctgcaaggg
gaggtggaggcccaaggagggggctttgagggcttggaggctccggacctgttggctgat
gagctgctgcctcagctggaggctgccctcagtcagcacgaccaccacgactccaactgt
tcgtggaccaatggtggggatggcgaaaggaatggaaagggagaggaagaagaagagatg
aaggaggaagaaaggatctccatatccatggactacaagatacagcctcccaagaacaag
aatgctaatggttccaacagccacacagcagcgcgggtcctcagccccccgatgaagagc
agctcatcctcctcgtcttcatcctcctacagctcgtcgttggagaagcgggcccagcgg
aggctggtgaaggagcagggggagcagcagcagcaactgatggaggaggctggggaggac
aagcagcagaaggctaacaggatcatccatgaggccattgctaaggcccgggagagagga
gagaagaacatccccagggttatgagtccagagagcttcccctctgggagctcctcggcc
cacaggagagagagagagagggagagggacagagacagagacagggagaggggccgtggc
aacaagaccaggaccaaggcctccaagaaagcccgcattgtgccctcgtccaagcccaaa
cagaaggctaagatcgggaaaatcgtcattaaatttggagggatgaagaagaagagggag
acagagtcttcagaggaggagtctgatgaagaacgcccgcctcgaagatactttaaagac
gatgactcgacgcgtcggtcgaaccgccaggtgaagaggaagaagtatgcagaggaggga
gaggccagggtgtctgatgaggaggtgaaggtcatggttaaaaccaagaagaccagcact
gctgcagcacgcaaagagccagcacagcagctgtttgtggaaaaccccagcgaggaggat
gctgcggttgttgacaagatcatgtcatctcgaattgtcaagaacgaggtcgctccagga
gttatcgtagaagtggaggagttctttgtaaaatacaaaaactactcctacctccactgt
gagtgggccgtagagcagcagctggagaaagacaagaggattcagcagaagatcaaacga
ttcaagattaaacaggcacagagagcccacttctttgcagatatggaggaggattccttt
aaccctgactatgtggaggtagacagagtactggaggtgtcctattgtgaagacaaggac
acaggagagcaggtagtgtactacctggtgaagtggtgctctctgccctatgaagacagt
acatgggaactgaagggggatgtggaccagagtaaaatagaggagtttgagctgctgcag
gcagcaaggccagactcccgcaggatggagcgtcccccagccagcctgtggaagaagagg
gatcagtcgagggagtacagaaacagtaacgtcctcagggactaccagctggagggagtc
aactggctcctcttcaactggtacaacagacggaactgtatactggcagatgagatgggt
ctggggaagactatccagtccatcacgtttctggaggagatctggcgtgtgggcatcagg
ggccccttcctcatcatcngccccctctccaccatcgccaactgggagagggagttcaga
acgtggacccacctcaacgtcatcgtctaccacggctccatggtcagcaggcagatgctg
cagcagtacgagatgtactccagggacacacagggtcgtgtggtgcggggagcctacaag
ttccacgccctcatcaccacctttgagatgatcctgggcggctgtccagagctcaacgcc
atcgagtggcgctgcgtcatcatagacgaggcccatcgtctcaagaacaagaactgcaag
ctgctagagggcttcaagctcatgaatctggaacacaaagctctcctgacagggaccccc
ctccagaacacagtagaggagctgttcagtctgctgcacttcctggagcctcaaagcttc
ccctcagagaataccttcatgctggagtttggagacctcaagactgaggagcaggtccag
aagttgcaggccatcctgaagcccatgatgctgcgtcgtctcaaggaggacgtggagaag
aagctggctcctaaggaggaaaccatcattgaggtggagctgaccaacatccagaagaag
tactacagagccatcctagagaagaacttctccttcctgtctaaaggagtcggccaggcc
aacgtccccaacctggtcaacaccatgatggagctgaggaagtgttgcaaccacccctac
ctcattaaaggtgctgaggagaagatcttggaggacttccgagaggtgtacagccctgtt
gcctttgatttccacctgcaggccatggtgcagtcggctggtaaactggtcctcatagac
aagctgctgcccaagatgaaggccgggggacacaaggtcctcatcttctcccagatggtc
cgctgtctggatatcctggaggactacctcatccagagaaggtacctgtatgagcgtatc
gatggcagagtgagaggtaacctgcgtcaggcagctatagaccgtttcagcaaaccagac
tctgaccgctttgtgttcctgttgtgtacccgggctggaggtctgggcatcaacttgact
gctgctgacacctgtattatctttgactcagactggaacccacagaacgacctgcaggcc
caggctcgctgccataggattggtcagaacaaggcggtgaaggtgtaccgtctgatcacc
aggaactcttacgagcgggagatgtttgaccgggccagcctcaaactgggcctggacaag
gctgtactgcagagcatgagtggcagggagaacagcgtgccgggaggagggccgacccag
cagcagctgtctaagaaggagatcgaggacctgctgaggaaaggggcgtatggagctctg
atggatgatgaggatgagggggccaagttctgtgaggaggatatcgaccagatccttcaa
cgcaggaccaagaccatcaccatcgagtctgagggacggggatctacctttgccaaggcc
agttttgtggcatccggaaaccgcacagacatttctctggacgaccccaacttctgggac
aagtgggccaagaaggctgagattgacatggacactgccaatggcagaaacagcctggta
attgacactccgagggtgaggaagcagacccgacccttcagtgccactaaggacgagctg
gcagagctgtcagagggggagagtgacaacgaggacaagcccaagctccgccggccccac
gaccgcctcaacagctatggcaggacagagtgcttcagagtggagaagaacctactagta
tacgggtggggtcgttggaaggatatcctgctccatggtcgttttaagaagcagctgaca
gagcgtgatgtagagtctatctgcagagcccttctggcctactgtctggttcactaccgc
ggtgacgacaagatcaagagcttcatgtgggacctgatcgccccctccgaggacggacag
accaaggaactacagaaccacctgggtctgtcgaccccagtccccagaggcaggaagggg
aagaagatgaagactcaatccagcacatttgacatccagaaggctgagtggatcaggaag
cacaacccagaacacatgctgcaggatgagggatacaaaaagcacctcaaacaccactgc
aacaaggtgttgctgcgggttagaatgctctactacctgaaacaagaggtgatgggaagc
cagtcacagaagatactggacggcgtggactccagtgagatcaagatctgggttcctgag
cccgacagctctgagctaccagccctgtggtgggacaacatctctgacaagtgtctgctg
ttgggggtctacaagcacggttatgagaagtataacacagtgcgtgcagaccctgccctc
tgcttcctagagcgggtgggccggccagacgagaaggccatcgctgctgaacagagagcc
aatgacttcatggatggggacgtggatgacccagaatacaagcctgccccagccttgctg
aaggacgatatggaggatgacgcctcctctcctggagacctggttgtcacagacaaccct
ggagagggtgctccagtgatgatggaagggttaggtggaggaggaggagatgcagcctac
tggccctcctcctcagtgctaacagccagactgagacgcctgatcacagcctctcagcgc
tacaccaagtccagacagatcctccacatccaccagacccagcacaccacccaggtcaca
ccctcactgtgtcccctgccacccaccctcaacgacactatcaaccccaagatggccgcc
aagatagaacgccagcagagatggacgaggcgagaggaagctgatttttaccgtgtggtg
tctacctttggtgtggtgtttgacccagacctgggccgcttcgactggaccaagttcaga
gccatggctcggctgcacaagaaaacagacgagagtctgcagaagtacctgtgggccttc
actgccatgtgcaggagagtgtgtcgcctgccaccaagagaaggagacacagcggtggac
ccctctctgtccattcagcccatcacagaggagcgtgcatctcgtaccctctacagagta
gagctgctacgccaggtcagggaacaggtcctgcgccaccccttgctctatgagcgcctg
cccctgtgccagctgggctcggacctgcccgtgtggtgggagaccggtacccacgaccga
gacctcctaatcggggccaccaagcacggcgtcagccgcacagactaccacatcctccga
gacccagagctctgcttcatggctgctcagcgcaactacagccagaataaaggagtccaa
cagccatcccagacccctactccgctcctgaaccccccgtaccaggctagtagagaccca
gccttggcagagtccccagtgccaaccccagccctgatggagagggaggacatcccgggg
gcagtgcccaaagaagaacctctctcggagggggaggagcgcatggagagagggggtcag
atggagggggagaggtggagtccccagcctgcccctctcaccccaacagggatagaggag
aagcctgatctgggggtggtgaaaggagagaacgagagccacatggtggcggcacggacc
aagccactcacacccaactcagccaccaggaaagagaagaaagccaataaaataagtcga
agagaggccagacgagccgcctccgcagcatcagactccgactcggacggctcctcctcc
agctcttcatcacgatcttcttcatcatcgtcatcgtcgtcctcttcctcctcacgctcc
ggatccagctcctcttcgtcttcatcctgctcatcaggctcctcatcttcctcttcctca
tcttcatcttcctctgttggcagtgagagtgagggagaggaaggaaagaccaaggtccca
acagtggccatcgcgaagggatttgacgaagacagtgtggcgtctctcagcaccactcag
gatgagatgcaggacagtcacgtgacagagaacggcagcaacaactcacaccaccacccc
ttccagggaggatacatgctggctgcatcctactggcccaaggaccgtgtgatgatcaac
cgtctggacagtatctgccaagcagtgctgaaggggaagtggccgggggcccggcggtcg
tacgaggcaggaggggccgtagcctccttctacaccaccaagctgctggacaatgcagct
gcggccaacaacagcagcaacctctgctcagcttccgcctcagcctcagaggacccctct
gcctcccctcagggttcaaaggtgaagaagcatgttgcaggagaaaaggagttctcagtg
aaaatgaatgaacaggaagggggtctgaagctgaccttccagaagcaggggcccggccag
cccctgaagaggcccctggagcctgaggaggggcccctgagccagcagcagtatcttaca
aggctccatgagctccagtgtgcctcagataccagtctggctgacttcaccaagccccag
gctgccagcttcccacaggcatctacaggtctggcaggtcagatgaagctgaacggaggt
atggatggccagccggtggtgaagaggaggagaggaagaaggaagaatgtggagggagtg
gacctgctctttatgaacaggaacagaggaccagccgtgcctgaaagcgtgcccccggcg
tggggtggtatgagtcaggctggcactgggctgtctattgcctcagggcagggtaacccc
ctaggggcccggggccctatggacacagagagcagggtctctgtcatcaacctgaaagat
gggacccgtctggccggagacgatgcccccaggaggagggagctggagctgtggctcaaa
gaacacccaggctttgtggctgacacaggggcattcatccctggagtgaataagaggcag
ctggagcagttccagcaggatggtagacccaagcagaagaggcatcgctgcaggaatccc
aacaagatcgatgtcaacagtctgacaggagaggagagggtccagatcatcaacaggaga
aatgcacgcaaggttggtggggccttcgccccccctctaaaggacctgtgtcggttcctt
caggagaacccagagtacggggttccaccagagtgggccgacgtcgtcaagcagtcgggc
tacctcccagagagcatgtttgaccggatcctgacaggacccatcgtaccagaggaggtg
agtcggcgtggacggaggcccaagagcgccctggccaaggctgcagctacagccaaccag
gcggccccatccctgggcctcaaccccctgctggccaatggcctcctctctggcatggat
ctatctagtctacaggccttccagcagaacctccaaagtctccagtcactgcagctcact
gccggcctcatgggcctgcccaccgatgctaacaacctggccgccatgtttcccatgatg
ctctctggcatggctgggcttcccaacctcctgagcatggggggtctgctggggaagccc
tcacaggacgcaacagggggagctgagcagaggaagaggaagaagggaagcagagaaggg
ggaggaggggagccctcgtctgcctcctccaaagccccctcctcccaatcacacggcccc
tcccacacctcggacaccaaaggtgaaaggacagaaggtcaaagcagggacggagatggc
cgcatccccagtgtccattccccctctagttcctctgccaccacctccacaaccacccca
ctaagtgcttctgctgcccaggcagcctccagtcaccctctgtctcttaaccccttgtta
ctctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtcc
accacacagccaccacacagtgactcaaacagtgaccacaaaccccacaagcccactaag
acctctaagaccgccacctcaaaacctctgtcgccaaggagaacaccagagtgtcaggaa
gaggagggccttggtgacaagagggaagagtcaggggaacacaaggaggagaacagtggt
ccagaaggctcggggaaggcggagtcatcttcttcatcagagtctgggagctcttcttca
tcatctgatgggtcatcggactctagcgatgaagactga
DBGET
integrated database retrieval system
