Oncorhynchus keta (chum salmon): 118379862
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Entry
118379862 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLIS2-like
KO
K09233
zinc finger protein GLIS2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118379862
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118379862
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118379862
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
118379862
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_6
Zap1_zf1
zf-C2H2_4
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
118379862
NCBI-ProteinID:
XP_052375511
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Position
5:30576354..30610083
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AA seq
556 aa
AA seq
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MRRCTAGPASSGLREGLDTAPLQSDLLEVGDPWAAAMLSLDEPLDLMLPRGCVNGRDRGA
RPPPTLTLSPIPFKRSRQLRMADDGTAVIVPASPASPHTGVLVVSRERPETPPTPPAVDL
STSPSSRHTSSSPEMTNGNGVSHHIIAGDSAHIHYVESRASSQAFQFFVPIGAGAGLHLP
SSMFIGQPNDKRASPDLSADEQLACRWRKCHLLFESLQDLVDHVNDFHVKPEKDSGYCCH
WDGCARRGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNHSHTGEKPYIC
PYEGCSKRYSNSSDRFKHTRTHYVDKPYYCKMAGCLKRYTDPSSLRKHIKAHGHSVAQEQ
GCPGGLSSLLKVGPLGVGMGGRGGNLGESELSYISGAHIIIPSAAAALLGGHALQGLAGS
MPLSPLAPRPLDLSTLGGCPSSPCNTSILSFNGSPLSLATKSSLGLSPAFPSSALGLGPT
MVPVSLGGSMGSSASERRAHHHGCHHKGKIGGGGEEGKNKLHRGGVLNLSTGASHDPLSW
VVIPSGTVVLKPAVVN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtgcacagcgggcccagcgtcgtctgggttacgggagggtctggacacagct
ccactgcaaagtgacttgcttgaggtgggagatccgtgggctgcagccatgctgtccctg
gacgagccattggacctaatgctcccccgggggtgtgtcaacgggcgggacaggggtgca
cggccaccccccaccctcacgctctctccgatacccttcaagcgctcccggcagctccgc
atggctgatgatggcacagccgtcatagtgcccgcctccccggcctcgccacacacaggt
gtgttggtggtctcccgggagaggccagagacaccccccaccccgccagccgtggacctc
agtacgtccccctcctcccgccacacctccagctccccagagatgaccaacggaaacggg
gtctcccaccacatcattgcaggggactcagctcacatccattatgtggagagcagagcc
tcctcgcaggccttccagttcttcgtgccgattggtgctggggccggactccacctgccg
tcatccatgttcattggccagcccaacgacaagcgggcctctcccgatctctcagcagac
gaacagctggcctgtcgctggaggaagtgccatcttctctttgagtccctgcaagacctt
gtggaccacgtcaacgacttccacgtcaaacctgaaaaggattctgggtactgctgccac
tgggacggctgcgctcgcagagggcggggcttcaacgctaggtacaagatgcttatccat
atccgtacacacaccaatgagaagcctcaccgctgccccacctgcaacaagagcttctct
cgcctggagaacctcaagatacacaaccactcacacacaggtgagaagccctacatctgt
ccatacgagggctgcagcaagcgctactccaactccagcgaccgcttcaagcacacgcgt
acccactacgtggacaagccctactactgcaagatggccggctgcctgaagcgatacaca
gaccctagctctctccgtaagcacatcaaggcccacggccactctgtagcccaggagcaa
ggctgtccgggtgggctgagctccctgctcaaggtgggtcccctgggggtggggatgggt
ggaagagggggtaatctgggggagtcggagctgagctacatcagtggggcccatatcatc
atccccagcgccgctgccgctctcctggggggccacgctctgcagggcctggcgggctcc
atgcctctatcccccctcgccccccggcccctggacctgagcacgctgggggggtgcccc
agctccccttgcaacacctccatcctgtctttcaatggttctcctctgagcctggccacc
aagtcgtccctggggctctccccggccttcccctcctcagccctggggctggggcccacc
atggtgcccgtgtccctaggaggatccatggggtcgtctgcctcagagcgcagggcccac
caccacgggtgtcaccacaaggggaaaattgggggtgggggggaggaggggaagaacaag
cttcatcgtgggggggtgctgaacctctccacgggggcctcccacgaccccctgtcctgg
gtggtcatcccctccggcacggttgtgcttaagccagctgtggtcaactaa
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