Oncorhynchus keta (chum salmon): 118379884
Help
Entry
118379884 CDS
T09424
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecule (CAM) interaction
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118379884 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118379884 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118379884 (sdc3)
Proteoglycans [BR:
oke00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118379884 (sdc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
118379884
NCBI-ProteinID:
XP_052328257
LinkDB
All DBs
Position
20:complement(21954769..22006650)
Genome browser
AA seq
433 aa
AA seq
DB search
MKLPPCLMTILAALLAHSALGQTWVPSIDLEGSSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERERERVREMERERDREREREKEREREKERERERERERQREIERERERERERARAAQ
TTISPHGPAAVPMATTSTGTPLAESVVPSSGVQDLITTEEEDEDVYLSPDPTTSMPMETT
TEEEEEEEVTTTDAETTPLPKTTAPPTTIGPALTERSSSAPFRPSVLVTTPIKAAPTERS
TRPQQPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTGS
SAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATV
TYQKADKQEEFYA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgccgtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggttcttctggagatgagttctatgat
gatgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agagagagggagagggaaagagagagagtaagggagatggagcgggagagggatagagag
agggagagagaaaaggagagggagagagaaaaggagagggagagagaaagagagagagag
aggcaacgggaaatagagagggaaagagaaagagaacgtgaaagagcgagagccgcccag
accaccatctcaccccatggcccggcagctgttcccatggcgaccaccagcacagggacg
cctctggcggagagtgtagtaccctctagtggtgtgcaggacctgatcaccacagaagaa
gaggacgaggatgtctacctgtccccagaccccaccaccagtatgcctatggagaccacc
acggaagaagaagaagaggaagaagtgaccactactgatgcagagaccacacccctccca
aagacaacagctccacccactacgattggcccagccctaactgagaggtctagctccgcc
ccctttaggcccagtgttctggtgaccacgccaattaaagccgcacccacagagaggagc
acacgcccacagcagccttctacgacaatgaataatgaattaggggttaatggacccagc
ggagactttgagatccgggaggaggaccgtcgccagggcaacgaggttgttggtcgtggc
cttggcatggagactggggcagaacctgatctgattggcaacacaattaacacaggaagt
tctgccgctcaacttcctcagaagaacatcttggagaggaaggaggttctgatagcggtg
atagtggggggcgtggtaggggccctgtttgcagcgttcctggtcatgctgctggtgtac
aggatgaagaagaaagatgaaggcagctacacactggaggaacccaagcaagccaccgtc
acctaccagaaagctgacaaacaggaggagttctacgcataa
DBGET
integrated database retrieval system