Oncorhynchus keta (chum salmon): 118379885
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Entry
118379885 CDS
T09424
Symbol
pum1
Name
(RefSeq) pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
oke
Oncorhynchus keta (chum salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
118379885
NCBI-ProteinID:
XP_052328258
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Position
20:complement(22009639..22049266)
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AA seq
1153 aa
AA seq
DB search
MSSVCVLKGKAVLWQDSFSPHLRTSTPSMPVVLSSGGHAPPAGQTPHAPSPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPIGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDEAGKDGPKGIFLDQWRDSAWGATDHSVSQPIMVSRRPGGGFHSGGEVGGS
VMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGPRDGEVEDEKREKPKAAFEVEK
LEMTEGENDVISDVINPNGLPVQNGLDVDVKEYSRQGQMQPAGTDTDMMGGVGGCVGGEG
MVPMGGGGGPKPQEDFSGVEQGVTMDTMESVMEPLQFDYNSQMAMDSQPTVGLFDYSNQQ
QLFQRPSALALQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISTGPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQGQNQQNQQQVMRGGGN
QRPLTPSQGPQGQQNDQLISAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVNT
GSRGGPVRLMAPAGSVIISPSAAQAAAAGGGANGGMGGGANGPFRGMQSQQPQQQGGGAM
SGNSFYGSSSLSNSSQSSSLFSQGSAQQGPGSASLGFGQSNSSLGATLGATLGGFGTAVA
NSSGGSGSRRDSLTGSSDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPVGMPLPNQGPSH
SLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSASSGSSLFSPSSQLFPSS
RLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERASS
AERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGC
RVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIDAF
KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHG
RAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVCSLTEGPHSALY
TMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYYMKNGV
DLGPLCGPPNGIM
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagggtaaagcagtgctctggcaggactcattcagcccc
cacctcagaacttcaactcccagcatgcctgtggtgctgagcagcggaggacacgccccc
ccggccggacaaaccccacatgccccgtcccctagccaacagggcgtggcgggtgccggt
cggtctcaggatgatgccatggtggattacttcttccagcggcagcacggagagcagcct
gggaaacaccgctggcccattggggataacatccacgacagccaggtgcggtcgatggat
gagctgaaccatgacttccaggccctggctctagaagggcgtgccatgggagagcagctt
ctgacaggtaagaagttttgggagagtgatgaagcggggaaagacggaccaaaagggatc
tttctggaccagtggagggacagcgcgtggggggccacagaccactctgtatctcagcca
atcatggtgtcccgtcggcctggcggtgggttccatagcggcggggaagtgggcgggtca
gtgatgtcaccgcggtcagagagtgggggtttaggagtcagtatggtagagtacgtcctc
tcctcctctcccgccgaaaaactggactcgtgccttcgcaagggaccctacggcccgagg
gatggagaggtggaggatgagaagagggagaaacctaaggccgcgtttgaagtagagaaa
ctcgagatgacggagggagagaatgatgtcatcagtgatgtcatcaaccctaatggactc
cctgtgcagaatggcctggacgtggacgtcaaagagtacagtcgtcaaggccagatgcag
cctgcggggacagacactgacatgatggggggtgtagggggatgtgtaggaggggagggt
atggtccccatgggaggaggcgggggtcccaaaccccaagaggacttctctggtgtggaa
cagggcgttaccatggataccatggagtctgtgatggagcctctgcagtttgactacaac
tcccagatggccatggactcacagcccaccgtggggctgtttgactacagcaaccaacaa
cagttgtttcagagacccagtgctctagcactgcagcagctgacagcagctcaacaacaa
cagtacgccttggcagcagcacagcaatctcacattggtctggctcctgcgtttgttccc
aacccttacatcatcagtacgggtccgcctggaactgacccctacgctgctgggctggca
gctgctgcaacactgggcccagcggtgatgcctcctcagtactacggggtgactccatgg
ggagtgtatccagccaatctgttccagcaacaggctgcagctgccaataactcagccaat
caacaggctcaaggacagaaccagcagaaccaacaacaggtaatgcgtgggggtggtaac
cagagacccctgacccctagccaaggtccacagggtcagcagaatgaccagctgatctct
gccgcagctgtcaactcggcgctcgccttcggacaggggctggcggccggcgtgcccggc
tatcccatgctggctccagctgcctactatgaccagacgggggcgctagtggtcaacaca
ggatctaggggcggacctgtacgcctcatggcccccgcgggctcagttattatctctccc
tccgctgcacaagcagcagctgcgggtggcggggctaacggcggtatgggaggcggggcc
aatggtccgttccgaggcatgcaatcccagcagcctcagcagcaggggggaggggctatg
tcaggaaactccttttatggatcctcctctctcagcaactcctcccagagctcctccctc
ttctctcaaggctctgcccagcaaggccctggctctgcctctctggggttcggtcagagc
aactcttcactgggagcaacattgggagctacgctgggaggctttgggaccgcagtggct
aactccagtggtgggagtggttctcgtcgtgactctctgaccggcagtagtgacctgtac
aaacgcacacagtcgagtctcactcccattggtcacggggggttctacaacggaaccctt
ggctttagctcctcccctgggcctgtcggaatgcccctgcccaaccaaggcccctcccac
tccctaaccccacccccatctctgtccaatcacagctcctcatccaacctcaacctggga
ggtctgaccaatggcagcggtcgtttcatttctgctgctccgggggcggaggccaagtat
cgcagtgccagttctggctcctccctcttctctcccagcagccagctcttcccatcgtca
cggctacgttacggaatgtcggatgtgatgccgtcagggcggagccggctcctggaagac
ttccggaacaaccgctaccccaacctgcagctgagagagattgctgggcacatcatggag
ttcagtcaggaccagcatggcagcaggtttatccagttgaagttggagagggccagctca
gcagagcgtcagctagtcttcagtgagatcctccaggctgcctatcaactcatggtcgac
gtcttcggaaactacgtcatccagaagttctttgagtttggcagtctggaccaaaagctg
gctctagcagagaggatcaggggtcatgtcctgtctctggccctgcagatgtatggctgt
agagtcatacagaaggccctggagttcatcccctcagaccaacaagttataagtgagatg
gtgcgggagctggatggccatgtattgaagtgtgtgaaggatcagaacggcaaccacgtg
gtgcagaagtgtattgagtgtgttcagccccacgcactacacttcataatagacgccttc
aagggacaggtgtttgccctctccacccacccctacggctgtagagtgatccagcgtatt
ctagaacactgccttccagaccagaccctgcccattctggaggagctgcaccaacacact
gaacaactagtgcaggaccagtatggtaactatgtgatccagcatgtattagaacacggc
agagcggaggacaagagtaagatagtagctgagatcagaggaaacgtactggggctcagc
caacacaagtttgccagtaatgtggtggagaagtgtgtgagccatgcgtcccgtgcagag
cgggccgtgttgattgacgaggtgtgtagcctgacggaggggccccacagcgccttgtac
accatgatgaaggaccagtacgccaactatgtggttcagaagatgattgacgtggctgaa
ccaacacagaggaagatcgtaatgcacaagatccggccccacatctccactctgaggaag
tatacctatggcaaacacatcctggctaagctggagaaatactacatgaagaatggagtg
gacctgggccctctctgtggccctcccaatggcatcatgtaa
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integrated database retrieval system