Oncorhynchus keta (chum salmon): 118379901
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Entry
118379901 CDS
T09424
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118379901
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
118379901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
CH
Motif
Other DBs
NCBI-GeneID:
118379901
NCBI-ProteinID:
XP_035622799
LinkDB
All DBs
Position
4:complement(60715314..60861403)
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AA seq
1175 aa
AA seq
DB search
MSEVDPVGGRASRRMSICSATNTRKHTRRGDGAATAFTQSPSGQAVTGRCFNDKDFRGGL
ENGILLCELLSSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDI
STRPNANRVADCSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEAEDT
ESPQRSIRDSGYIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVVVARGIG
SDGRGSDSESDAGPHGGRKLPDVRKDDMLARRTSVSEPRVMVPFNQYLPNKSNASGYVPT
PLRRKRGDHESREEGSGGGGGSRKSWSTATSPIGGDIPFRFSHRAASVSDDPESVSMIDM
RCEEDAILPHHSQVRHELMHNQYNMMKEEEDHWQDDLARWKSRRRSVSQDLIKKEEERKM
MEKLMTGEGGAISQRKKSIKTYREIVEEKERRENDLREAYRLARTPEEAALVLHRYAQRF
TISEAVLERLQLPKLLDRSISEDPTATTNTRLTLTPTSCSPTPTSPEEDKNGPLKYLRQQ
SLPAPKFTATVEAQVVGFPQGLSHRPQIRSRKPEPNPSIRAVSPKSVPLLMPKPYNQPKG
MQMLVGPRPGKVDGLLRVNGDMGNDEVTTPESEGRTSPLRFYPSPATPTASSDGSDTHPC
EATPPPTHSPSPRASPLPAMPEVAQCGTSTGTAVTSSSVPGESDAQKKDNAQESTPPSRP
TSLPSELQSTECLVEAGGRSAAGPLGEEPNTTETAVQPSPATESQQAPKEQTEVCMNATA
TRQNTTILRPVLSEHATQQAQPMTAPVSEPSLEVSRRADEVSTLADPGPVRNKPPCEAPT
TEGAEQERGTAAVTQVSSPVVAQAKRGDRWSWDPNEERKRQERWQQEQERMLQEKYQHEQ
EKLKQEWERAQREVEDEERRYHEEERRILEETVAPLTPLSSTLPLPIRGDTPAPMDPQDT
IVRSLADWERKQELLERQGGNTERVVWKGQDNDRSSDISTVSRDESLKTAVSSISQNSSQ
ADKLTPSFQNGQRAPPTMAVPQPPNKKQNTEVLLDCTKPSQQAPSRDRRCGSIESMGPSP
SNSPTTCPSDMPQSPNRSVSGKKLCSSCGHPLGKGAAMIIETLSLYFHIQCFKCGVCKGQ
LGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtggaccctgtgggagggagggcgagtaggagaatgtcaatctgcagtgcg
acaaacacgcgcaagcacacacgcagaggagatggggctgcaactgcattcactcaatct
ccatcagggcaggcggtcacaggcagatgcttcaatgacaaggacttcaggggaggcctg
gagaatgggatcctgctgtgcgagttgctgagctccatcaaacctggcttggtgaagaag
atcaacagattacccactcccatcgctggcctggacaacctgagtgtgttcctgcgtggc
tgtgaggagctgggactgaagggctctcagctgtttgaccctggggacctgcaggatatc
tccacacgtcccaacgccaacagggttgcagactgcagtaggaaactcaaaaatgttctg
attaccatatactggctgggccgggctgccaacagctgcacctcctacaacgggcccaca
ctggacctgaaggagtttgaaggcctgctatcacaaatgcggaaggaggcagaggacact
gagagcccccagcgcagcatacgggacagcggctacatcgactgctgggactcggagcgt
agcgactcgctctccccgcctcgccacggccgagaggactccttcgacagcctggactca
ttcggctcacgctccagacagacgccctcgccggacgtagtggtcgcccgcggcattggc
agtgatggccgtggcagcgactccgagtccgacgccggaccccacgggggcaggaagctg
ccagacgtgcgcaaggatgacatgctggctcggcggacctcggtgagcgagccccgcgtg
atggtgcccttcaatcagtacctgcccaacaagagcaacgccagtggctatgtgcccaca
ccgctgcgcaggaaaaggggtgaccacgagagccgggaggagggcagtggagggggtgga
ggcagccgcaagagctggagtaccgccacctcgcccataggaggcgatatacccttcaga
ttcagtcacagagctgctagtgtatcagatgacccagaaagtgtgagtatgattgacatg
cgttgtgaggaggacgccatcttgccacaccacagccaggtgcgccacgagctcatgcac
aaccagtacaacatgatgaaggaggaagaggaccactggcaggatgacctagcccggtgg
aagagtcgcaggagaagcgtctcccaggacctgattaagaaggaggaagagaggaagatg
atggagaagctgatgactggtgaggggggggccatctctcagaggaagaagagcatcaaa
acctaccgggagattgttgaggagaaggagcgtcgtgagaacgacctccgcgaggcctac
cggttggcccgcacccctgaggaggcagcgttggtcctccaccgctacgcccagcgcttc
accatcagtgaagcggtgttggagcgcctgcaactgcccaaactgctggacaggagcatc
tctgaggatcccaccgctaccaccaacacacgtctcaccctcacccccacttcctgttct
cccacccccacctccccggaagaagataaaaatggccccctgaagtacctgaggcagcag
tcgctcccggcacccaagtttaccgctactgttgaggcccaggtggtggggttcccccag
ggtttgtctcatcgcccccagattcggtcgcgcaagcctgaaccaaacccctcgatccgg
gccgtctcacccaagtctgtgcctttgctgatgcccaagccttacaatcaacccaagggc
atgcagatgctggtgggacccaggccaggcaaggtggacggcttgctgcgagtcaacggc
gacatgggaaacgatgaggtcaccactccagagagcgagggaaggacctcccctctaagg
ttctacccctcccctgccacacctacagcctcctctgatggttctgacacacacccatgt
gaggccactcccccacccacacacagcccctcccccagggcaagtccattaccagccatg
ccagaagtggcacagtgtggcacaagcacaggcactgcagtgacatcatcttcagtgcca
ggagaaagtgatgcccagaagaaggataatgcacaggagtctacaccgcctagccggccc
acctcactgccctcggagctgcagagcacagaatgtcttgtggaggcgggaggcaggtct
gctgcaggcccactgggggaggagcccaacacaacagagactgcagtacagccctctcca
gctacagagtcacaacaagctcccaaagaacaaacagaagtgtgtatgaatgccacagcg
actagacagaacaccactatcctccgtccagtcctatcagagcacgccacacaacaagct
caaccaatgaccgcaccggtcagtgagcccagcctggaggtgtctcggagagcagatgaa
gtttctaccttggctgatccaggacctgtcagaaacaaaccaccatgtgaagctcccaca
acagagggggcagagcaggagcgtggtacagcagcggtcactcaggtgtcatccccggta
gtggcccaggctaagcggggtgaccgctggtcttgggacccaaatgaggagcgaaagcgt
caggaaaggtggcagcaagagcaggagcgcatgcttcaggagaagtaccagcatgagcag
gagaagctgaaacaggagtgggagagagcgcaaagagaggtggaagacgaggagaggaga
taccatgaggaggagcgaaggatactagaggagactgtggcccctctgacccccctctcc
tccaccctgcccttgcccatccggggggatacccccgcgcctatggacccccaggacacc
atcgtccggtcgctggccgactgggaacgcaagcaggagctgctggagagacaggggggg
aacaccgagagagtggtatggaaaggacaagataacgacaggagtagtgacatcagcaca
gtgtccagagatgagagtctgaaaacagcagtcagctcaatcagccagaacagcagtcag
gcagacaagctgacaccgagttttcagaatggtcagagagcaccacccaccatggccgtt
ccccagccccccaacaagaaacaaaatacagaggtcttactagactgcaccaaacccagc
cagcaggcgccctctcgggacaggaggtgtggctccattgaatccatggggcccagtcca
tcaaactcacccaccacatgcccatctgacatgcctcaatctccaaacaggtcggtgagc
ggtaagaagctgtgctccagttgcggtcaccctttgggaaaaggggcagccatgattatt
gagaccctcagcctttacttccacatccagtgctttaagtgtggggtctgtaagggacag
ctgggtgacaccaccacggggacagacgtgaggatccggaacggcctcctcaactgccac
cagtgctacatccgctcccgctcagccggccagccaaccacattgtga
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