Oncorhynchus keta (chum salmon): 118379917
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Entry
118379917 CDS
T09424
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118379917
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118379917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
Motif
Other DBs
NCBI-GeneID:
118379917
NCBI-ProteinID:
XP_052327454
LinkDB
All DBs
Position
19:81547801..81568329
Genome browser
AA seq
535 aa
AA seq
DB search
MVKCTEAHRDREPRMSHYTDEPRFTIEQIDLLQRLWRTGMTKQEILHALDTLDRLDREHV
AKFGHRTSYGGGASSSVSDPNCTTSYGGGASSSVSDPNCTTSYGGGASSSVSDPNCTTSN
NTAATTSSSSMTVDDDNNNNNSTSGSSEVNNTTLASSCTNSTVAQTQYLSPRGGLSPSPS
NSYDTSPLPSAVRHSPVSLVTMAQNGGRDSLAATPNGKLSPPRYPVNSAAAARAFGFEAT
EEELEIDDKVEELMRRDGSIVKEEIKSFLGNRRISQAVVAQVTGISQSRISHWLLQHGSD
LSEQKKRAFYHWYQLEKTSPGATLNMRPAPMAMEEMEWRQTTPHISTAPGIFRLRRGSRF
TWRKECLAVMESYFNDNQYPDEAKREEISNACNAVIQKPGKKLSDLERVSSLKVYNWFAN
RRKEIKRRANIEATILESHWIDVQSPGGHSNSDDIDGGDDTEQACDLPYFDKRPMARPFG
FYRLEPTSPTQDDGTDHQDPISLAVEMAAVNHTILALSRTGGVPSNIKTEVPDDD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatgtacagaggcacatcgagatagagagccaaggatgtctcattacacagac
gagcctcgcttcaccatcgagcagatcgacttgctccagaggctgtggcgtacgggcatg
accaagcaggagatcctacacgccctggacaccctagatcggctggaccgcgagcacgtg
gccaagtttggacatcgcacctcctacgggggaggagcaagcagctctgtgtcagaccct
aattgcaccacctcctacgggggaggagcaagcagctctgtgtcagaccctaattgcacc
acctcctacgggggaggagcaagcagctctgtgtcagaccctaattgcaccacctccaac
aacactgcagccaccacctcctcatccagtatgactgttgatgatgataataataataat
aattccaccagtgggagcagcgaggttaacaacaccaccctggcctcttcctgcaccaac
tctaccgtcgcacagacacagtacctctcaccgcgcggggggctgtccccgtcgcctagc
aacagctacgacacctccccactgccctccgccgtccgccactccccagtgtcactggtc
accatggcgcagaacggggggcgggacagcctggcggcgacgcccaatgggaagctctcg
ccgccgcggtacccggtgaacagtgcagcggccgccagggcgttcgggttcgaggcaact
gaggaggagctggaaatcgatgacaaggtggaggagctcatgaggagagacggcagcatt
gtgaaggaggagatcaagtcgttcctggggaacaggagaatctctcaggctgtggtggcc
caggtcacaggaatcagtcagagcaggatctctcattggttgcttcaacacggctctgac
ctcagtgaacagaagaagagagctttctaccactggtaccagctagaaaagacctcccca
ggtgccactctaaacatgcgacccgcccccatggccatggaggaaatggagtggagacag
accacaccccatataagtaccgccccaggaatcttccggctacgcagaggaagtcgtttt
acctggaggaaagaatgtctggctgtgatggagagctacttcaatgacaaccagtaccct
gacgaagctaagagagaggagatctctaacgcctgcaacgctgtcatccagaaaccaggg
aagaagctctcggacctggagagagtcagctctcttaaagtctacaactggtttgccaac
cgacgcaaggagatcaagagacgagctaatattgaagccacaatactggagagccattgg
atagacgtccagagtcctggaggacactccaacagcgacgacatcgatggaggcgacgac
acagaacaggcctgtgacctgccctacttcgacaagagacccatggccagaccctttggc
ttctacaggctggagcccacttcacccacacaggacgatggtactgaccaccaggacccc
atctctctggctgtggagatggctgcagtcaaccataccatcctggctctgtcccggacc
ggaggggtgcccagcaacatcaagacagaggtcccggacgatgactga
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