Oncorhynchus keta (chum salmon): 118379993
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Entry
118379993 CDS
T09424
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118379993
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
118379993
NCBI-ProteinID:
XP_052347588
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Position
33:complement(24985606..>25026474)
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AA seq
755 aa
AA seq
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TPSHTIRTPGVGSKYTRGFHGDDGSSFTVTWVGDGTGVILVLSTISAPLDSFFEGGSSRL
YRSADYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNPGGVIFTSTDA
GVSFKSVQLPFHPAQPITFHFLNPEYLVVISIDGSLWLSLDFGTVWKKVHEGTQSFTWGS
GITLFFSFSPKGTVESDRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGGFLFTSVIETLG
APRVIYVSSDQGDQFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGTVYTSDD
RGILYSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGEWTLLNK
PQNVECGEDSRNDCNLHIHGEHSRYNGITPMLPLSDPTAVGLVIAHGSVGDSISSTRPDV
YVSEDGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDEGQCWKVYNFT
EQPIFFAGLTSEPGTKTMNISVWGYRPEDDHQPMWVVVTIDFQSLLTRECGNQDYVQWLA
HATEGGDLATEGCVLGYKETFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLCDYGYYR
HENSSECMRQLDTADHALEVCLNGEEEELRTSGYRKVPGDKCEGGFTPLHIKETVNRHCG
NSSHPPTASPYSETPREKMLLIVVCVGSGIVILVAVATAVYTVRRMGYGNRAPTYRFSVL
QLQDDDCSIAADPESVASSNGTSVFPVDSDDDLIE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
actccctctcacaccattagaacaccgggtgttggatcaaaatacacacgagggtttcat
ggtgacgatggctccagttttactgtcacatgggttggagacgggacaggggtaatcttg
gtgttgtctacaatcagtgctcctctagattccttcttcgagggcggttcttcacgattg
taccgcagtgcagactatggcaagtctttccatgatatttctcatctcatcaataacacc
ttcataaggaaggaatttggacttctggctggaccagggaactctcaacaggtgattctg
actgcagacacaccggttttggacaaccccggtggcgtcatctttacctcaactgacgcc
ggagtgtcgtttaagtctgtccagctgccttttcacccggcccagccaatcaccttccac
ttcttgaatcccgagtacttagtggtcatcagcatagatggcagcctgtggctttctctg
gactttgggactgtgtggaaaaaggttcacgaaggaacacaatctttcacgtggggctcc
ggcatcactctcttcttcagcttcagtcccaaaggaacagtggagtcagacagaagagga
gagctgttcctaaagaggacagaagacctggggaagacgttcaccaccgtggcacacagc
atcttctccttcggctatgtaggaggcttcctcttcacctcagtcatagagacactggga
gccccacgtgtcatctatgtgtcctcagaccaaggggaccaattcaacaaggcccagctc
ccctccgcctccactgagcagttctactcggttctggatggggatgaggacatgattttc
atgcatgtggacaatccaggagaggaaagctactttgggacggtgtacacatcagatgac
cggggcatcctgtactctaagtctctagagcgtcacctgtttggtggggaagggaagagc
gacttcaccaacgtcacctccatgagaggagtgtacctcaccaacatactggaggaggac
ggccgcattcggacagtcatttcatttaatcgagggggagagtggacactcctcaacaag
ccccagaatgttgagtgtggtgaggattcaagaaatgattgtaacttgcacatccacggt
gagcacagtcgctacaacggcatcactccaatgctgcctctctctgaccccactgccgtt
ggccttgtcatcgcccacggcagtgtgggggactccatctcgtcaacacggcctgacgtg
tacgtgtcggaggacggggggtacaagtggaggggatccttgaggggccctcatcactac
agcatcctggacgctggggggctcgtcgtggctgtggaggcccaccccatggacggccaa
atcaacaccatcaagttctccacagatgagggccagtgttggaaggtgtacaactttaca
gagcagcccatcttcttcgctggcctgacatccgagccgggcaccaagaccatgaacatc
agcgtgtggggctaccggcctgaggacgaccaccagcccatgtgggtggtggtcaccatt
gacttccagagtctcctcactagagagtgtggtaaccaggactatgttcagtggttggcc
catgccacagagggcggggacttggccacagaggggtgtgtcttgggctacaaggagacc
ttcaggaggctgaggaagctgtctgtctgcaggaatggacgggactacgtggtgagcagg
cagaaaagcccctgcccctgcaccagagaggactacctatgtgactatggttactatcgt
catgagaacagctcagagtgtatgagacaactggacactgcagaccacgccctggaggtg
tgtctaaatggagaggaggaggagcttaggacatccgggtaccgtaaggttcccggtgat
aagtgtgagggaggtttcactcccctgcacataaaggagacagtcaacaggcattgtggg
aactccagtcatccccccactgccagcccatattctgaaaccccgagagagaagatgctg
ttgatcgtagtttgtgttggatcggggattgtcattctggtggctgttgccactgctgtc
tatactgtaaggagaatgggctatggaaatagggcgccaacgtatcgcttctctgtcctg
cagcttcaggacgacgactgctccattgccgccgacccagagagtgtcgccagtagcaac
ggaacatcagtcttcccagtggattcagatgatgatcttattgaatga
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