Oncorhynchus keta (chum salmon): 118380055
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Entry
118380055 CDS
T09424
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118380055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118380055
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118380055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118380055
NCBI-ProteinID:
XP_052368977
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEEEMVGGTTPGGPVDSEAQKRSPEDAVLQERGKWANKTEFLLSMAGEIIGLGNVWRFPY
LCYKNGGGVFFIPYFVFLFFCGIPVFFLETALGQYTSEGGVTAWRKICPMFEGVGIASQV
IVAYLNIYYIVVLAWGLFYLFNSFRNPLPWSTCDNEWNTENCHNLSSMLLNPHLSQLDSD
WSFLHNQTEYNDYNMLSNETMKITSPEEEFWARRVLRTSDHVSLGAVHWDLALCLLLAWI
ICYFCIWKGVKSTGKVVYFTATFPYLMLFILFIRGVTLPGAGEGIKYYLWPQMDKILEPG
VWRDAGTQVFFSYAVCQGVLTSLGSYNKYNNNCLKDCVGLCILNSATSIFAGFAVFSVLG
FMAHSLDLDMNEVVKGGPGLAFIAYPKAVSLLPGAQFWAVLFFLMVILLGLDSQFVCVES
LATSITDMFPGILRRPGRREILVLVIAVVCFLLGLPLITENGIVLFQLIDSYGPSGTSLL
FIACFECIAVAWVYGANRFLDNIEDMIGYHPFPPLLKYCWLFVTPFICGITLVYDTLTSS
STNLNLEYAPGPWASRVASLLILTPLMCIPVYILLCLWRNPKGMTTASSDLRQARPHQPR
LTVCERVIIEGQEKPPRNAGDRDEKLAMEESSGV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagatggttggagggaccactccaggaggaccagtggactcagaggcccag
aaacggagccccgaggatgcggttctgcaggagaggggcaagtgggccaacaagactgaa
tttttgctctccatggctggtgagatcattggcctgggcaacgtatggcgcttcccttat
ctgtgctacaagaacggaggaggtgtcttcttcatcccgtactttgtgttcctcttcttc
tgtggtatccctgtgttcttcctggagacggcattgggccagtacaccagcgagggcggg
gtcacagcctggaggaagatatgtcccatgttcgaaggagtgggaattgcatcccaagtg
attgtggcgtacttgaacatctattacatagtggtgctagcctggggtctgttctaccta
ttcaactccttcaggaatccactgccctggtccacctgtgacaatgagtggaatactgag
aactgtcataatttgagttccatgttgttgaacccacacctctcccagttggactcagac
tggtccttccttcacaaccagactgaatataatgactacaatatgttgagtaatgaaacc
atgaagatcacatctcctgaggaggagttttgggctcgtcgggtgttgaggacgtcagat
catgtgtctctgggtgctgtacattgggacctggctctctgtctgctgctggcctggatc
atctgctacttctgcatctggaagggagtcaaatctacaggcaaggtggtgtacttcaca
gcaacgttcccctacctgatgctcttcatcctgtttatccgaggtgtgactctaccaggg
gctggagagggcataaagtactatctctggcctcaaatggacaagatcttggagcctggg
gtgtggcgtgacgcagggacccaggtgtttttctcctacgctgtatgtcagggggtcctc
acctctctgggcagctacaacaagtacaacaacaactgtttaaaggattgcgtgggactc
tgcattctcaacagtgccaccagcatctttgctggattcgccgtcttctccgtactggga
ttcatggctcactcacttgacctggacatgaatgaagtcgtgaaaggaggacctggtctg
gctttcatcgcctatcccaaagccgtgtccctgctaccaggggcccagttctgggccgtc
ctcttctttcttatggttatcttactgggtctggacagccagtttgtgtgtgtagagagc
ttggccacatccatcactgacatgttccctggtatactgcggaggcctggccggagagag
atcttagtactagtcatcgctgtagtctgcttcctactgggtctgcctctcatcacggag
aatgggatagtcctctttcagttgattgactcgtacggccccagtgggaccagtctgctg
ttcattgcatgttttgagtgcatcgccgttgcctgggtctacggtgcgaaccgtttcctt
gacaacattgaagacatgataggctaccatcctttccctccattgctgaagtactgctgg
ctgtttgtgacaccattcatctgtgggatcaccctggtgtatgacacactgaccagttca
tcaaccaatctaaatctagagtacgcacctgggccctgggcctcccgagtggcctctctc
ctcatcctcaccccgctgatgtgtatccctgtctacatcctgctgtgtctgtggaggaat
cctaaagggatgaccactgcgtccagtgacctgcgccaggcacggccacaccaacccaga
ctcaccgtgtgtgagcgtgtcattatcgagggacaagagaaaccccccagaaacgcaggg
gatcgggatgagaagctggccatggaggagagcagtggagtctag
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