Oncorhynchus keta (chum salmon): 118380105
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Entry
118380105 CDS
T09424
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118380105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118380105
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
118380105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
118380105
NCBI-ProteinID:
XP_035622997
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All DBs
Position
34:complement(71317481..71321357)
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AA seq
320 aa
AA seq
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MTPGFSPRGGDRGGRGGFRGRGSFGDRGGGRGGFGDRGGRGGFRGRGGGGFRSPSGEGGF
RGRGGGRGTPRGRGGRGGFGAGRKVTVEPHRHEGVFICRGKEDALVTKNMVIGESVYGEK
RMSVEEGETKIEYRAWNPFRSKLAAAILGGVDQIHIKPGSKVMYLGAASGTTVSHVSDIV
GPEGLVYAVEFSHRSGRDLLNVAKKRTNIIPIIEDARHPHKYRMLVGMVDVIFADVAQPD
QTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMGSENMKPQEQLTLEP
YERDHAIVVGIYRPAPKNKK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaggattcagcccccggggtggtgatcgaggcggcagaggaggcttccgggga
agaggaagctttggagacagaggtggtggacgggggggttttggagatagaggcggacga
ggaggattccgaggcagaggtggaggtggatttaggtctccaagcggtgagggtggcttc
agaggccgtggaggtggtcgtggcacccccaggggtagaggtggacgtggcggcttcggg
gctggcaggaaagtcactgtggagcctcatagacatgaaggagtgttcatctgccgtggt
aaggaagatgccctggtgacaaagaacatggtgattggagagtccgtgtatggagaaaaa
aggatgtctgtcgaggaaggagaaacaaagattgagtacagagcgtggaaccctttccgg
tcaaagctggcagcagccatcttgggaggagttgatcagatccacatcaaacctggctcg
aaggtcatgtacctgggtgccgcatcagggacgacagtgtcccatgtgtcagacatcgtt
ggacctgagggtcttgtgtatgctgtggagttctctcacaggtcaggacgtgatctgctc
aatgttgccaaaaagagaaccaacatcattcccatcattgaggatgcccggcatccacac
aaataccgcatgcttgttggcatggtagatgtcatcttcgctgatgtggcccagcctgat
cagaccagaattgttgcactcaatgctcacaatttccttaagaacggagggcactttgtc
atctcaatcaaggcaaactgcattgattcaacggcagcaccggaggctgtgtttgctgcg
gaggtgaagaagatgggctcggaaaacatgaagccccaggagcagctgacattggagcct
tatgagagagatcacgccatcgtagtaggaatctacagacctgctcccaagaataagaag
tga
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