Oncorhynchus keta (chum salmon): 118380499
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Entry
118380499 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118380499
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118380499
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118380499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Gp5_trimer_C
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
118380499
NCBI-ProteinID:
XP_052343092
LinkDB
All DBs
Position
30:1718605..1728476
Genome browser
AA seq
863 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGELAEGPEDPSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAEAQEEAPTRAPGN
GVEVQPEAEVPMETGEVLEEPVVEEMAVIVEPEAEMEPVADVEAEPVADVEAEPVADIEA
EPVADVEAEPVADVEAEPVADVEAEPVADVEAEPVADVEAEPVAEVEAEAEVEAELEAEV
EAELEAEVEAELEAEVEAELEAEVEAELEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEP
EAEVEAEPEAEVEAEPEAEVEAEAEAEPEAEVEADPEAELEAEMVPELVVEVVPQLPSPV
TTTPPVSRPASPLVQAPPAAPAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPL
TLDRLPRHVPTSPAPQAPAEGSSRTRQHVLSRQSTAEYEAQSAGTGSDTGSGNVPEPGTT
PPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYES
ERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFGELSY
FMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVASMAEGVEPPVSVSGHSIGGAGEAR
TEEREGEDGMGLGLSPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLNDED
EEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWL
SENSTCPICRRAVLVSANRESVV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttctgagccaggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctaggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaactggcagaaggtccagaggac
ccgtctaacggcgacaccctcttggattggctgaacaccgtcaggcggacaggcaacacc
acccgcagtggtcaccgaggcaaccagtcatggcgggcggtgagccggaccaacccaaac
agcggagacttccggttcagtctggagatcaacgttaaccgtaacctggccgagcagcag
gcccgcgccgagggggaggccgaggcgcaggaggaggccccaactagagcacctggcaat
ggggtggaggtccagccggaggcggaggtgcccatggagacaggagaggtgctggaggaa
ccagttgtggaggagatggctgtcatagtggaaccagaagcggagatggagccagtggct
gatgtagaagctgagccagtggctgacgtagaagctgagccagtggctgacatagaagct
gagccagtggctgacgtagaagctgagccagtggctgatgtagaagctgagccagtggct
gacgtagaagctgagccagtggctgacgtagaagctgagccagtggctgacgtagaagct
gagccagtggctgaagtagaagcagaggctgaagtagaagctgagctagaggctgaagta
gaagctgagctagaggctgaagtagaagctgagctagaggctgaagtagaagctgagcta
gaggctgaagtagaagctgagctagaggctgaagtagaagctgagccagaggctgaagta
gaagctgagccagaggctgaagtagaagctgagccagaggctgaagtagaagctgagcca
gaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagta
gaagcagaagcagaagctgagccagaggctgaagtagaagctgatccagaggcagaacta
gaagcagagatggtcccagagttagtagtagaggtagtcccacagctgcccagccctgtc
accaccacccctcctgtctccagaccagccagtcccctggtgcaggcccctccagccgcc
cctgcccctcctagcccgccccctgaggagcctccgcgacggggccagagacgagcccgc
agccgtagccctgagcagcgccggaccagggctcgcaccacacgaagtcgttcccccctc
accctggaccgactcccccgccacgtccccaccagccccgccccccaggcccccgcagag
ggaagctcacggactcgacagcatgttctgtcccggcagagcaccgcagagtacgaggcc
cagtcagccggaacagggtctgacacggggtctgggaacgtcccagagcctggtaccacc
ccaccccaggagggagaggccgcgggcggggagggagcagcaggacgacgtccccccacc
atcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgccagagggacagc
attgctaacagaacccgctcacgctcccagaactccaacaacaccttcctgtacgagagt
gagaggggcgggttccgcaggaccttctccaggtccgagcgtgcgggtgtgaggacgtac
gtcagcaccatcaggatccccatcaggaggatcagtgatgcagggttgggagaggccacc
tccatggctctgcagaccatgatacgacagatcatgaccggcttcggagagctcagctac
ttcatggactcagactctgactcctcggactcaaaccgtggcggtggtaaccccactggc
gctgccgacctggccgaggcgctcaacactcccgacgggggagtagccagcatggcggag
ggggtggagcctcctgtctcagtgagcgggcatagtattggaggagccggggaggcaagg
acagaggagagggagggggaggacgggatgggtctaggtctgtccccaggaataggttta
ggggtggggggcacccccagggaggggcgagctcggccccgtgcccccatcagtctggag
gaaccggggtcactacccttcctccgccttgctcacttcttcctcctgaatgatgaggat
gaggaacagcccagaggactcaccaaggagcagatcgacaacctctccaccaggaacttt
ggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtatgctgaggggaac
aagttgaggaagttgccctgttctcatgagtaccatgttcactgtatcgaccgctggctg
tctgagaactccacctgtcctatctgccgcagggccgtgttggtgtctgctaaccgggag
agtgtggtctaa
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