Oncorhynchus keta (chum salmon): 118380526
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Entry
118380526 CDS
T09424
Symbol
wdr21
Name
(RefSeq) WD repeat domain 21
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118380526 (wdr21)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118380526 (wdr21)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Syntaxin-5_N
Motif
Other DBs
NCBI-GeneID:
118380526
NCBI-ProteinID:
XP_052327413
LinkDB
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Position
19:79657572..79673214
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AA seq
508 aa
AA seq
DB search
MKKGNWRDRGRDRRRLGYRSDWQRDRTQEQRYGSSEAGPSYRDRTPENRSISDTAASSSS
APELPGFYFDAEKNRYFRLLPGHNNCNPLTRGLLQEREQEKHRARMITEDERPRKKAPRA
GLNSALLLQKRHLGLLPGNSYSRLIHEVKVSGMRRHRLEVQSSESSSPNTDHFRLIVGDS
ACERVFTVNDVSHGGCKYGIMNFRGCSRGSLSVKMCDNLYFTNRKVNSICWASVTHSDSH
VLLCLVGMAETPGCVSLLPASLFSNSNPDQPGMLCSFKISTAWSCAWCLNPQADKTFSTG
LSRRVIVTDAVTGRRQTYGIGSDVLAQQFALRAPVLFNGCRSGEIFSIDLRQRGRRDHSW
KACRFSQDSAITSVRILQDENYLLAADMIGEIKLWDVRVTKPVRKYEGHHNQHAYLPLHV
NEAEGLLMAVGQDCYTRLWSLGDGQLLRTIPSPHPAGKDMIPSVVFSSQLGGNRGLPGLL
MAVRHDLYYFPYNSDYQEGGGVVTEAAC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagggaattggcgtgacaggggcagggaccgtaggcgactcggttaccgttct
gactggcaaagggacaggacacaggaacaaaggtatggcagcagtgaagcaggcccctcc
tacagagacaggaccccagagaataggtctatttctgatactgcagcctcctcctcctct
gctccagagctgccggggttctactttgacgctgagaagaaccgttacttccgtctgctg
ccaggccacaacaactgtaaccctctgaccagagggctgctgcaggagagagagcaggag
aaacacagggccaggatgatcactgaggacgagaggcccaggaagaaagcaccaagagca
ggcctgaactcagctctgttgctgcagaaaagacacctgggtctgctacctgggaactct
tacagtaggctgatccatgaggtgaaggtgagtgggatgagacgtcacagactggaggtc
cagagctctgaaagcagcagtcccaacacagaccactttagactcatagtgggtgactct
gcatgtgagcgagtgttcacggttaacgacgtgtctcacggaggctgcaagtacggcatc
atgaacttcagaggctgcagcaggggctccctgtctgtcaagatgtgtgacaacctctac
tttacaaatagaaaggtgaactctatctgctgggcctccgtcacccactctgactcacac
gtcctcctgtgtctggtgggcatggcagagactcctggctgtgtcagtttactaccagcc
tcgctcttcagcaactccaacccagaccagccggggatgctgtgtagttttaagatctct
acagcctggtcctgtgcctggtgtctcaaccctcaggctgacaaaacatttagcacgggt
ctgtctcgcagggtgatagtgacggacgcagtgacgggcaggagacagacctatggcatc
ggcagtgatgtgctggcacagcagtttgccctcagggctccggtcttgtttaatggctgc
aggtcaggagagatcttcagtatcgacctgcgtcagagaggcagacgggaccacagctgg
aaggcctgcaggttctcccaggactctgctatcacctccgtacgaatactacaggatgag
aactacctactggctgcggacatgattggagagatcaagctgtgggatgtacgagtaaca
aaaccagtgcggaagtacgagggtcatcataaccaacacgcctacttacccctccacgtc
aacgaagctgagggactgctgatggctgtgggtcaggactgctacacccgtctgtggtct
ctgggggacggccagctcctgaggaccatcccatctccccaccctgctggaaaggacatg
atccccagcgtggtcttctcttctcagcttggaggcaacagaggcctgcctggtctcctc
atggctgtcaggcacgatctgtactacttcccttataacagtgactaccaggagggagga
ggggtagtgactgaggcagcctgctag
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