Oncorhynchus keta (chum salmon): 118380698
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Entry
118380698 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118380698
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118380698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118380698
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
DCC/UNC5 family
118380698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
Tissue_fac
SusE
Sp38
EphA2_TM
Herpes_UL74
Bile_Hydr_Trans
DUF4834
Motif
Other DBs
NCBI-GeneID:
118380698
NCBI-ProteinID:
XP_052371775
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHAEKGTAARPFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTAPQARVEWKKDGTFLSLAPDDGRRRVLPDGSLLISSVVHSKHNKPDE
GTYQCVATIDSLGTIASRTARLTVAGMPRFSSQPAAASIRLGDSQVLACDVNPDLVPLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCMVENAGPAKTSEEAQLTILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPTPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEEDAGVYSCMADITNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVXNGDAVIPSDYFKIINDHNLQVLGLVKSDEGFYQCLAENDAGNMQSSAQL
IILEHDVALPTPPPPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGDDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNG
LGESSAVLKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDITVTTLSDVPSAPPQNL
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSDPIDPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNS
LPKNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRT
STWSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSD
KMANDQANLPVKPGSNQPPLDHGFGSSHGKPGITGSGDNHILVIVVIISVGAFTIIVVVV
GAFLCTRRTTSHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPN
PVMTDTPIPRTSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPFD
TQPPQPVISAHPIHSLDNHHHHYHTGSLASPTRSYLHHHQGSAHLRPHACATPISYLDMV
GSTESVRNTPSTEPLPPQAQPPCQAEHQHPEPEGSYQDSTATDDEPSASGSYCSAGQPPT
AHVRPTHPLKSFAVPANPTAIFESPALPSMPLLTQTGPQLHSVKTASIGTLGRVRPPMSV
TVPSAPDVPETSKMLEDVDSSYEPDELTEEMAHLEDLMKDLNAITTA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgctgaaaaaggcacggcggcgcggcccttcagccccttc
tggttctcggtggagccgtgggacacactggctgtgagaggtgccccagcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgcgccccaggcccgtgtggag
tggaagaaggatggaaccttcctgagcctggcgccagacgacgggcggcggcgtgttctg
cctgatggctcgctgctcatctctagcgtggtgcactccaagcacaacaagcccgacgag
ggcacgtaccagtgtgtggccaccatcgacagcctgggaaccatcgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccagcagcagccagcatacgc
ctgggagacagccaggttctggcctgcgatgtcaacccagacctggtgcctttagcccgg
tgggagcgtgagcgtgagcccctggagctgagctctaggttggtgcagctacccaacgga
gccctggtggtgagcaacgcttcggaggccgacgctgggctctaccgctgcatggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctcacaatactgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agtttgctgctgccgtgtgtggtgacgggttatccaacgccctacgtccgatggatggtg
ggagacaagcttgttgaggagagtgaggggaagttggagttggtgggaggaggcagtctg
ttgatctacaacctgactgaggaggatgcaggcgtctacagctgtatggcagacatcact
aacaacactatcgaggccaaggcagagctcactgtacaagttcctccggagttcctgaag
aggccggccaacatctacgcccacgaatccatggacatcatgtttcagtgtgaggtcaca
ggttcccccgcccccaccgtcaaatgggtcnaaaacggagacgctgtcattcccagcgac
tacttcaaaatcattaatgaccacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttctaccagtgtctggcagagaacgatgcagggaacatgcagtccagcgctcagctc
atcatcctagagcacgatgtagccctccccacccctcctcccccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgttgctaaccccactggccccaccccc
tccgccccccgtgacgtcgtggcctcgctggtctccacccgcttcatcaagctcacctgg
cgccctcctgctgagcccaacggagacgacctcacctactctgtctacttcaatcaggag
ggtaccaacagagagcgtatcctgaacaccagtcggccaggtgagatgcaggtcaccatt
cagaacctgatgcctgactccaagtacaagttccgggtggtggcacataacaagaacggc
ctgggagagagctctgccgtcctcaaggtggccacccagggtgaagtgcaagttcctggc
cccgcccccaacctgcaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggtaacggagacgtcctcacctacaaggtctactatatggagaagggt
ctggacctggaacaggacatagacgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcattcgagtggtggccttcaacaagcacggtccgggagtgtcc
acaggagacatcaccgtcaccaccctgtctgatgtccccagtgcccctcctcaaaacctc
actgtggaagttcacaactcaaagagcatcatggtccgatggcagcccccaccaccaggc
gcccagaacggcgagattactgggtataagatccgttaccggaaaggaacgcggaagagc
gaggcggcagaaaccacgggaggcacccagctattccaactcatcgacggtctggagcgg
gggacagagtacacgttcagagtatcagccatcacagtgaacggctccgggcccgccaca
gagtggagcaccgcagagaccttcgagagcgacctggacgagtccagggtgccagacatc
cccagctcgctacatgtgcgcccgctggtcaacagcatcgtggtgagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctacggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcattgagaacctagacccc
agctcccactatgtgataaccctgaaggccttcaacaacgtgggggaggggatccctgta
tacgagagcgccatcaccaggccacagtcagaccccatagaccctgatgttgatttgtat
gaactcttccatgcgccatacacaccagtaccagaccccacccccatgctacctcccgtg
ggcgtacaggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactct
ctgcccaagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaac
atccccgccaacaccaagctcaagacggccaacaccaccaacctgagccacatggtgacg
ggcctgaagcccaacacgctctatgagttctctgtcatggtgaccaagggccggaggacc
agcacctggagcatgacggcccagggaaccacctttgagaccattcccagctcgtccccc
aaagatgtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcag
cccccctcagaggccaatggaaaaatcacaggctacataatctactacagtactgatgtg
aatgcggaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccaccag
atccaggagctgactctggacaccacctactacttcaagatccaggcccgtaactccaag
ggcatgggcccaatgtcagaggccgtacacttccgcacccccaagactgaatcctctgac
aaaatggctaatgaccaagccaatttgccagttaaaccaggaagtaaccaaccacctctt
gaccatggctttgggtcttcacacggaaaaccaggaattacaggaagtggggacaaccac
atcctggtcatcgtcgtcatcatctctgtgggagcgttcaccatcattgtggtggttgtg
ggggccttcctctgcacacgacgcaccacctcccaccagaaaaagaagcgggcggcctcc
aagtcgtccaacagctcccacaagtacaagggcaactccaaggacctgaagcctccagac
ctatggatccaccacgagcggctggagctcaagcccattgacaagtcccccgagcccaac
ccggtgatgactgacacccccatcccccgcacttcgcaggacatcaaccccgtggacccc
agcctggacaacagcctgctgcagagacggaactcctaccgaggccacgaatcagaagac
agcatatctgcgctggcagggcgccgggggatgcggcctaaaatgatgatgcccttcgat
acacagcccccccagcctgtgattagcgctcaccccatccattcccttgataaccatcac
caccattatcacacgggcagcctggcatccccgacacgcagctacctccatcaccaccag
ggcagtgcccacctgcgcccgcacgcctgcgccacccccatctcctatctagacatggtg
ggctccacagagtcggtgaggaacacccccagcacagagcccctcccaccccaggcccag
cccccctgccaagccgagcaccagcacccggagcccgagggcagctaccaagactccacg
gccaccgacgatgagcccagcgccagcggcagctactgcagcgccggccagccccccact
gcccacgtgcgccccactcatcccctcaagagctttgccgtgcccgccaaccccaccgcc
atcttcgagtcgcccgccctgcccagcatgccgctgcttactcagactgggccccagctc
cactcagtaaagacagcctccatcggcaccctgggcagggtacgcccccccatgtcagtc
acggtgcccagtgcgccagacgtgcctgagaccagcaagatgctggaggatgtagacagt
agctacgagcctgatgagttgacagaggagatggcccacctagaggacctgatgaaggac
ctgaacgctataaccacagcctga
DBGET
integrated database retrieval system
