Oncorhynchus keta (chum salmon): 118380714
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Entry
118380714 CDS
T09424
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
oke04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118380714
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
118380714
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118380714
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118380714
03036 Chromosome and associated proteins [BR:
oke03036
]
118380714
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118380714
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118380714
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118380714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
118380714
NCBI-ProteinID:
XP_052355354
LinkDB
All DBs
Position
37:complement(18275481..18348388)
Genome browser
AA seq
1664 aa
AA seq
DB search
MAAAYRVVVSSVSCYSSVVVDRRAQSHAVHYCSGSCGALSQGLDCTVAHRSTCSELLTAP
SHTFTHNLTRNANSPHQIPNSSKLSMTGCNGGSGVPNDPNSVYGVVGEDSPPWRGKKANT
TTTTTSSGPDRPLQSSASLKDITGEAINLASGKLKEFSFEKLRLSTSHVTFRKGRKVRPD
SYSRRSTDLDIVYGHFTGNVGGTGNGTITGNGNANDENLPPFSDTTKVLKGLSPASITAG
GGSLSTTSLSSVSRAGGGSTSSLSSACSGSLEAGLNTVASLYLSSLADESLIARLLEKTR
AGEEGGVGGAGGEDIRACLDILVKCSEDLKKCTDIIKQCISRKSPGGGEDGGASPESIYR
AVMTRLSSYLRKLPLELEGAGLGLGSGAGGQGSGIGGHSELAELVSSLHMLQQAAVPFSP
IFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPGSSLSLSTMPETAGRHKVQTNGLQHTH
TLSHTHPPSPHTHTLSVSTPPSQAHTPSLQTHTPSARTHTPSISPMEALFIEEDADLGRG
LNRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHVHVTHTLQSAGED
LTCPPTSEHTPSVTHRDHDIDRLLMDLECLSQSMGRERDRVREGEREREAEPPLPVKTRQ
RGTGQGNTSPQTQPCLQTQTQINPQAQRPVPVSHLTANAQATRSTPSSPAPLPQAEDSMA
GLGDEEDGVLLLRILESIESFAQELVDSGGSPGNTGKTGAQSKEKEVMRLLQDTLATASK
TDTLTQAKLPGSPPAGQGDYGPVHVSASTPTPAPRLTDGPVHVSASTPTPAPRLTDGPVP
TALPVSTAPTPVPAPIPTTLAESVSTAPTPVPAPIPTTLAESVSTAPTPVPAPIPTTLAE
SVSTAPTPVPAPFPTTLAESVSTAPTPVPAPIPTTLAESVSTAPTPVPAPIPTTLAESVS
TAPTPVPAPIPTTLAESVSTAPTPVPAPFPTTLAESVATDQATPSAPIPTTLAESVATDQ
ATPSAPIPTTLAESVATDQATPSAPIPTTLAESVATDQATPSAPIPTTLAESVATDQATP
SAPIPTPVPPTTVVPTPSEAAAGRQHPPVADLTAVLTTTATPPPSPVPPPTPTPGEAPVA
TIAAPPVAVRHPVAPSDVVALRDIGSTLLIQQTPEVIRVQSNKQDKKSGTPPSAPLSPTP
SVPSPHLSPSPPPTPVVLTPPPPPPPALNIPRFYYPRGLPGATKVNHDAAITAIETAFTE
FEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIATWRKLLHSCYDDS
SKFIYLLAKPGCSYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQRIFYMVN
RSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFWELDTDHDLYI
DPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFLISEEDKKNPTSIE
YWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDLVKPESQGKIT
LSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSDWDKYASEEYEILV
AEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctatcgcgtggtagtgagcagtgttagttgctacagcagcgtggtggtg
gaccgccgggctcagagtcacgcggtgcactactgctccgggtcatgtggggcgctgtcc
cagggactggactgtactgttgcccatcgcagcacctgctccgagctgctgaccgccccc
tcacacacattcacacacaacctgacccgaaacgctaactctcctcaccaaatccccaac
agctctaaacttagtatgaccggctgtaatgggggtagtggtgttcctaatgatcctaac
agtgtgtatggtgtggtgggggaggacagtcctccatggcgaggtaagaaggccaacact
accaccactactaccagctctggtcctgaccggcctctccagagctctgccagtctgaag
gacatcacaggagaagccatcaacctggccagtggcaaactcaaagagttctccttcgag
aagctccgcctctccaccagtcacgtgaccttcaggaaaggtcgcaaggtcaggccggac
tcgtacagccgtcggtcaacggacctcgacatcgtctacggacacttcaccgggaacgtc
ggaggaacggggaatggaactattaccggaaatggaaacgccaatgatgagaacctgcct
cctttcagcgacaccaccaaggtgctcaaaggcctatcgcctgctagcatcaccgccggg
ggcgggtctctatccacaaccagcctatccagtgtctccagggctgggggcgggtccacc
agtagcctatccagcgcctgctctggttccttggaggcggggctaaacacagtggcgtct
ctctacctcagctcattagccgacgagtccctcatcgcccggttactggagaagacccgt
gcaggggaggagggaggagtgggaggagcagggggggaagacatacgggcctgtctggac
attctggtcaagtgttcagaggacttgaagaaatgtactgacatcatcaagcagtgtatc
agtaggaagagtcccgggggaggggaggatgggggagccagtccagagagcatctacaga
gctgtgatgactagactgagctcctatctgaggaaactgcctctagagctggagggggct
gggttagggttagggtcaggggctggaggtcaagggtcagggattggaggtcatagcgag
ttggccgagctggttagtagtctccatatgctgcagcaagctgctgtccccttctcaccc
atatttgggaatgatcaaccgccacggtatgaggacgttgttcagaaccctcctttaccc
aagagcagggatatactgccaccctcgtcactcgctccaggctcttctctctctttgtcc
actatgcctgagacagcagggagacataaggttcagaccaacgggctgcagcacacacac
actctgtcacacacacaccctccctcaccgcacacacacacgttgtccgtttctacccct
ccatcccaggcacacacaccttccttgcaaacgcacactccgtcagcgcgcacacacact
ccgtccatctcccccatggaggctctcttcattgaagaggacgcagacctgggaaggggg
ctgaacagggcttccagacacacacactcacacaccccgaccagaagcctcacacacact
cacagtcggaacgggacagcttttagtccacacacaccccccagctccgcgcacacacac
ctcagccccaatctgtcacacgtacacgttacacacacactccagtctgctggtgaagac
ctcacctgccccccaacctccgaacacaccccttctgtcactcatagagaccacgacatc
gacaggcttctgatggacttggagtgtctgtcacagagcatgggtcgggagagagaccga
gtcagagagggagagagagaaagagaggcggagccccctctccccgttaagaccagacag
agggggacaggacaggggaacacctccccacaaacccaaccctgtctccagacacaaacc
caaatcaacccccaggctcaaaggcctgttcctgttagccacctaaccgctaacgcccag
gccacgaggtcgacccccagctcgcctgctcctcttccacaggcagaggacagcatggcg
gggctgggagatgaggaggatggggtcctgctgctgaggatcctggagagcattgagagc
tttgcccaggagctggtggactctgggggtagtcctgggaatactgggaagactggggct
cagagcaaagagaaggaggtgatgagactcctacaggacactctggctactgcatccaag
actgacactctgacgcaggccaaactacctggatctccaccagctgggcaaggtgactat
ggacctgtacatgtgtctgcctccacaccaacacctgcacccagacttacagatggacct
gtacatgtgtctgcctccacaccaacacctgcacccagacttacagatggacctgttcct
acggccctacctgtctctacagctcccacacctgtccctgcccctatccccacaacccta
gcagagtctgtctctacagctcccacacctgtccctgcccctatccccacaaccctagca
gagtctgtctctacagctcccacacctgtccctgcccctatccccacaaccctagcagag
tctgtctctacagctcccacacctgtccctgcccctttccccacaaccctagcagagtct
gtctctacagctcccacacctgtccctgcccctatccccacaaccctagcagagtctgtc
tctacagctcccacacctgtccctgcccctatccccacaaccctagcagagtctgtctct
acagctcccacacctgtccctgcccctatccccacaaccctagcagagtctgtctctaca
gctcccacacctgtccctgcccctttccccacaaccctagcagagtctgtcgccacagac
caagctacaccttctgcccctatccccacaaccctagcagagtctgtcgccacagaccaa
gctacaccttctgcccctatccccacaaccctagcagagtctgtcgccacagaccaagct
acaccttctgcccctatccccacaaccctagcagagtctgtcgccacagaccaagctaca
ccttctgcccctatccccacaaccctagcagagtctgtcgccacagaccaagctacacct
tctgcccctatccccacacctgttccaccaactacagtcgtacccacaccttcagaagca
gccgctggacgtcaacatccacctgtagctgacctgacagctgtacttaccaccacggcc
acccctccaccctcccctgtcccgccccctacacccacacctggagaggcacctgttgca
accatcgctgctcctcctgttgccgtgagacacccggttgccccaagcgatgtggttgcc
ctgagagacatcggctcgacgctgctcatccagcagacgcctgaggtgatcagagtccag
tccaacaagcaagataagaaatctggcacccctccttcagcccctctctcccccaccccc
tccgttccttccccccacctctccccctctcctccccccactccagtcgtcctcacccct
cctcctcctcctccccctgccctcaacattccccgcttctactaccctcgagggttaccg
ggggcaacaaaagtcaaccacgatgcggccatcactgccatagaaacagccttcacagag
tttgaggaggagaaggctgatatttacgagatgggcaagatcgctaaggcatgtggctgt
cctctgtactggaaggcagccatgtttaacggagcgggaggagagaggaccggcttcgtc
tctgttcactccttcatcgctacctggagaaagttgttacatagttgctatgacgattcg
tctaagtttatctacctcctagcgaagcctggctgttcctacctggaccaggaggacttc
atacctttattacaggacatagtggacactcacccaggactgacgttcttgaaggatgcc
ccagaattccattcccgttacatcaccaccgtgattcagcggatattctatatggtcaac
cgctcgtggacaggtcgcatcaccatgacggaactacgcaggagcaacttcctgcagacc
ctggccctgttggaagaggaggatgatatcaaccagataacagattatttctcttatgag
catttctatgtgatctactgtaagttctgggagttggacacggaccacgacctttacatt
gaccctaaggacctggctcgttacaacgaccacgcatcttcaagcagaatcattgagagg
ttgttctcaggagccgttacacggggtagctcagtgcagagggaagggaggatgagttat
gcagagttcagctggttcctcatctcagaggaagacaagaaaaaccctaccagtatagag
tactggttcaggtgtatggacacagatggggacggtgtgttgtctatgtttgagttggag
tacttctatgaggagcagtgtagtaggatggaggggatgggcattgaacccctacccttc
acagacctgctctgtcagatgctagaccttgtcaaacctgaaagccaaggtaagataacc
ctgtctgatctgaagaggtgtaggatggctcatatattcttcgacacgttcttcaacctg
gagaaatacctggaccacgagcagagagaccccttcgctttgcagaaggacatagacaat
gagtgtccagagccttcagactgggataaatacgcttcagaggaatatgagatcctggtg
gcagaagagacagctaatgaacagctgcaggaggggacatttgatgatgactatgaggag
gcggagcttcctgttcaaggagagatggttgggaataagatggataagctgctcatatca
gatctgtcagcatga
DBGET
integrated database retrieval system
