Oncorhynchus keta (chum salmon): 118380750
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Entry
118380750 CDS
T09424
Name
(RefSeq) long-chain fatty acid transport protein 1-like isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118380750
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oke01004
]
118380750
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118380750
Lipid biosynthesis proteins [BR:
oke01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118380750
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
118380750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118380750
NCBI-ProteinID:
XP_035623622
LinkDB
All DBs
Position
5:27049524..27064038
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AA seq
696 aa
AA seq
DB search
MRNAASASLSLGSLGLLRLFGVPWSWSLAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALVYDATGETWTFTQLDLLSNAVAQWA
LAQGWAPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDALLHCVGVSVSRGIV
FGAELAGASSLCLISKPHLSASSLCLISLPHLSASSLCLYFSHSYLSLLSFFVSSAMLEV
SSSLSPSMVRFCTGELSVDCLASLSAQNLDYILASAPTLPPPSCIPPKSFNDRLFYIYTS
GTTGLPKAAIVVHSRYYRIAAFGYHAFRMRQDDIIYDCLPLYHSAGNIMGVGQCLINGLT
VVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSEKGHRVRLAVGNGLRPSV
WEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYPICLMKVDEETTE
LVRDRHGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIANNVFKKNDSAYLS
GDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVAVYGVSVPDVEGK
AGMAAIADPTGTFDCDVFLREVQRALPPYARPVFLRISPQVDTTGTFKIQKTRLQREGYD
PRLSTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcagcgagtgcctctttgtctctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagcttagcagcaggcttcggggtctttctgggcacaggtggt
tggaagtacctctacatcgtagtccgtactgccaaaagagacctaaatggcctttacgtg
ttgttacgagtcaagatagccttgtggcaccacctacggcgcaacagcaatatcccctcc
atctttgcccagacggtgaagcagcacccaaataaacccgccctcgtctacgatgccaca
ggagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctgggccccgggggatgtggtggccctcttcatggagagccggcccttg
caggtggccctctggctgggcctggccaaggtgggggtggaggcagcactcatcaacttc
aacctgcggagggacgctctcctgcattgtgttggagtgtctgtgtccagagggatcgtg
ttcggagccgagctggctggtgcctcatctctctgcctcatctctaagcctcatctctct
gcctcatctctctgcctcatctctctgcctcatctctctgcctcatctctctgcctctat
ttctcgcactcctacctctccctcctctctttctttgtctcctcagccatgttggaggtg
agctcatccctgagcccgtcgatggtgcggttttgtacaggagagctcagtgtagactgt
ctggcctccctgtctgcccagaatctggactatatcctggcctcggcccctacactgccc
cctccttcctgcatcccacccaagagcttcaatgatcgtctgttctatatatacacctca
ggcaccacaggactcccgaaagctgccatagtggtgcacagtcggtattaccgtatcgct
gcttttggctaccatgctttccgcatgcgccaggatgacatcatctacgactgccttccc
ctctaccattctgcaggtaatatcatgggtgtaggccagtgtctcatcaatggactcact
gtggtggtgaagaagaaattctcagccagtcgcttctgggaagattgcatcaagcacaac
tgcactgtggtgcagtacataggggagatctgtcgctacctgctgtcccagccggtgcgg
ccttctgagaagggtcaccgggttcgcctggcggtggggaatgggctgcgccctagcgtc
tgggaggccttcaccgagcgctttggggtggcccaggttggggagttctacggagccact
gaatgcaactgtagtatcgccaacatggatggcaaggtgggagcttgtgggttcaacagc
cgcatcctgcccaatgtgtatccaatctgcctcatgaaagtggatgaggagaccacagag
ctggtgagggacaggcacggcctgtgtgtgccctgccgtcctggggagccagggctgctg
gtgggaaggatcaaccaacaggatccgctacggaggtttgatggctacgccaaccaggat
gccaccaggaagaagattgccaacaatgtcttcaagaaaaatgactcggcatatctgtca
ggggatgtgttggtgatggatgagctaggctacatgtacttccgggaccgcagtggagac
acgttccgctggagaggagagaacgtctccaccaccgaggtggagggaacactgagtggt
ctgctgggccaggccgatgtggctgtgtatggggtatctgtaccagatgtggaagggaag
gcagggatggctgccatcgcagacccaacagggacatttgactgtgatgtgttcctgcga
gaggtccaacgggccctgcccccttacgcccgtcccgtgttcctacgcatctccccacaa
gtagacaccacaggtacctttaaaatccagaagacccggttgcagagggagggatacgat
ccgcgcttatcaactgatcagatttactttttgaactccagagcagggcgttatgaggct
gtgaatgaggagctacacagtgctatagtggagggtagaatggctctatga
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