Oncorhynchus keta (chum salmon): 118380836
Help
Entry
118380836 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va-like
KO
K10357
myosin V
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118380836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118380836
04131 Membrane trafficking [BR:
oke04131
]
118380836
03029 Mitochondrial biogenesis [BR:
oke03029
]
118380836
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118380836
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118380836
mRNA cycle factors
P-body specific factors
118380836
Membrane trafficking [BR:
oke04131
]
Others
Actin-binding proteins
Myosins
118380836
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118380836
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118380836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118380836
NCBI-ProteinID:
XP_052323002
LinkDB
All DBs
Position
17:57488198..57562983
Genome browser
AA seq
1860 aa
AA seq
DB search
MAASELYSKYARVWLPDAAEAWKPAEITKDYTPGDRALCLQLEDGTNLEHKIDPQTNSLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIVLVAINPYESIPIYD
HDIIHAYSGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSSEANVEDRVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKNYHIIGANMR
TYLLEKSRVVFQATEERNYHIFYQLCASSHLPEFKPLQLGNADDFHCTNQGGSPVIEGVD
DAKEMCSTRKAFSLLGINETYQMDLFQILAALLHLGNVEVEERSADSSTILPDNSHLTVF
CELMGVAYQDMSHWLCHRKLKTATETYVKPLSKVHAVNARDALAKHIYAKLFSWIVDHVN
EALRSAVKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
EIPWTLIDFYDNHPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTFLKKSDLFDK
PRMSNKAFIILHFADKVEYQCEGFLEKNKDTVNEEQIIVLKLSKFELLLELFSDEEKPAG
SLTSRSKMTRPVQAQRDHKKTVGTQFRNSLHLLMETLNGTTPHYVRCIKPXDLKSPFMMD
PMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFNRYRVLMKLKDILSDRKQTCRNVLEK
WVQDQDKYQFGKSKIFFRAGQVAYLEKLRSDKLKKACVRIQKTIRCWLTRKRYLRMRRAA
ITIQKNIRGYQARCLVAFLRRTRAAVIIQKNQRMLVARRRYQQQRSASITMQRLLRAYQA
RQTYRKLLYEHKVLTIQRWVRGWLARRRCRRSLRAVVYLQSCVRRMAARRELRKLRVEAR
SVEHFKKLNVGMENKIMQLQRKVDEQHKENRELSERLRTVERSRAAEGERLGREVERLRV
AEEESRVKADGVPSLLEQLSFLRQELETTREEKEAIGEEARTYRVDTEKVVSELNENNRL
LITEKGDMNQLIQEQRQQIAESKAQAKVGTQLESDIREERDHYQSLLSEYTHLKERHADL
KEEMTISVITNKPGRRRTDSNYSSNESEGTPSSAEGRHSSVKTHSSTRSSSGFTESETRS
LRGDDAPHQDAPHQDASHQDAVAMSVLLKLQRRVTELEQDKQTLQRHLDKRDEAQQDQVK
NAEKQRTAGRAELDLEALKRQELESENKRLKTNLAELRQSLATVANTNPGAKTNPGAKTN
PGAKTNPGAKTNPGAKTSTSSPGPGTAPYNVLLEQLNSSNEELEVRKEEVLLLRSHMVRQ
EVLKHNKEAYGEMHKMIHLGETKEADGSTPDYHKLNEDGELWLAYDGLKETNSLLVSQLQ
VQDRRHEEEVEELREEVLRVREENRQQQQFLSQSLLLPQEARIEASLHHEITRLTSGNLD
LMEQQEKQDKMIRKLKKQLKVYVKRVEEYEAGGQMESVGPEPRSPVGITRKERDFQGMLE
YRRGDESKLLKSLVVELKPRGVAVNFLPGLPAYILFMCLRHADYSNDDQRVSVLLNSTIN
SIKGVIKRRGDDFETVSFWLANTCRFLHCLKQYSGEEAFIKNNTPRQNEHCLCNFDLSEY
RQVLSDLAIQNYQQLVRCMEEALQPMIVPGMLEHENFQGVLPGRRGEEAAVVVGLFHATL
IQHDVDPELIKQGVRQQFYIICSVTLNNLLLRKDMCSWSKGLQIRYNVWQLEEWLEEKGL
TDCGAKEMLEPLIQAAQLLQVKKKTEEDAQALCTMCSALTTLQIVKVLTLYTPVIEFEER
VSISFIRTIQALLKGRVESPLLLMDTKKIFSVTFPFTHSPLALETIQIPSSLNLGFLTRV
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttctgaactatactccaagtatgcccgggtctggctcccagatgctgcggaa
gcatggaagccagcagagatcaccaaggactacactcctggagacagggctctgtgtcta
cagctggaagatggcacaaacttggaacacaagatcgacccccagaccaatagtttaccc
ccgctaaggaaccctgatatcctggtgggggagaatgacctgacagctctcagctacctc
cacgaaccagcagttctacacaacctcaaagtgcgcttcgtggagtccaagatcatctac
acctactgcggcatcgtgttggttgctatcaacccctatgagagcatacccatctatgac
catgacatcatccacgcctacagtggacagaacatgggcgacatggatcctcacatcttc
gctgtggctgaggaggcttacaaacagatggccagagatcagaggaaccagtctatcata
gtgagtggggagtctggggctggtaagacagtctctgctaagtatgccatgaggtacttt
gctacagtcagcgggtcctccagcgaggctaatgtggaggacagagtgctggcctccagc
cccatcatggaggccatcgggaatgcaaagacgactagaaacgacaacagcagtcgcttt
gggaagtacatcgagattggattcgacaaaaactaccacatcatcggggccaacatgaga
acgtacttgctggagaaatctagagtggtgtttcaggctaccgaggagaggaattaccat
atcttctaccaactgtgtgcctcctcacaccttcctgagttcaaacctctccagttaggc
aacgctgatgatttccactgtaccaaccagggaggtagccctgtcatagagggagtagac
gatgccaaagagatgtgcagcaccaggaaggctttctcattgctgggaatcaatgaaacg
taccaaatggacctcttccagatcctggccgctctgcttcaccttggcaacgtggaggtg
gaagagagatcggcagacagcagtaccatcctgcctgacaatagtcacctgacggtgttc
tgtgagctgatgggcgtggcctaccaggacatgtctcattggctgtgccacagaaaattg
aagactgccacggagacctacgttaagcccctctccaaagtgcatgcggtcaacgcacgg
gacgcgctggccaaacacatctacgccaaactcttcagctggatcgtagaccacgtcaat
gaggctctgcgctctgctgtcaaacagcactccttcattggggttctcgacatctatggg
tttgaaacgtttgacgtcaacagttttgagcagttctgtattaactatgccaacgagaag
cttcaacagcagtttaacatgcatgtgttcaagctggagcaggaggagtacatgaaggag
gagattccctggactctgatagacttctatgacaaccatccctgtatcaacctcatcgag
gccaaaatgggggtcctggacctgttggatgaggagtgcaaaatgcccaaaggctctgat
gacacatgggctcagaaactttacaacaccttcctgaagaaaagtgatctttttgacaaa
cctcgtatgtccaacaaagcctttatcatcctccactttgcagacaaggtggagtaccag
tgtgagggattcctggagaagaataaggacactgtcaatgaagagcagattattgtgctc
aaactaagcaagtttgagctgctgttggagctgttcagcgacgaggagaagcctgcaggc
tccctgaccagtcgcagtaagatgacacggcctgttcaggctcagagagaccacaagaag
accgttggaacgcagtttcgtaactctctacatctgctgatggagactctgaacggaact
actcctcactatgtacgctgcatcaagccanntgacctcaaatccccattcatgatggac
cccatgagggcagtacagcagttacgggcttgtggagtcctggaaaccatccgcatctca
gcagcaggcttcccatccaggtggacctaccaggagttctttaaccggtaccgggttctg
atgaaactgaaggacattctctcagacaggaagcagacctgcaggaacgtcctggagaaa
tgggttcaggaccaggacaaataccagtttggaaagagcaaaatcttcttcagggcaggt
caggtggcctatctagagaagctgcgttctgataaactgaagaaggcgtgcgttcgtatc
cagaagacgatcagatgttggctgaccaggaagaggtatctccgtatgagacgagctgcc
atcaccatacagaaaaacatacgaggttaccaggcgcgctgtctggtagcgttcctgagg
aggaccagagcagcggttatcatccagaagaaccagcgtatgttagtggccaggagacgc
taccagcagcagaggtctgcatccatcaccatgcagcgtctgctacgggcctaccaggcc
agacagacctaccgcaagttgctgtacgaacacaaggttctcaccatccagaggtgggtg
agaggctggctggccaggcggaggtgcagacgctccctgagggccgtggtttatctccag
agctgtgtgagacgcatggctgccaggagggaactgaggaagctcagggtggaggctcgc
tctgtagaacacttcaagaagctcaacgtcggcatggagaacaagatcatgcaattgcag
aggaaagtggacgaacagcacaaggagaacagagagctcagtgagaggttgcgtactgtg
gagcggtcccgggcagcggagggcgagagactgggtcgagaggtggagcgactgcgcgtg
gcagaggaggagagcagagttaaagcagacggggtaccctccctcctggaacagctgtca
ttcctccgtcaggaattggagactaccagggaggagaaagaggccataggggaggaggct
aggacgtacagggtggacacagagaaggtggtgtcagagttgaatgagaacaaccgcttg
ttgataacggagaaaggcgatatgaatcagctgatccaggaacagagacaacagatcgca
gagagcaaggcccaggctaaagtcggtacgcagctggagagtgatatccgtgaggagcgt
gaccactaccagagtctgctgagtgaatacacgcatctaaaagagagacacgctgacctg
aaagaggagatgactatcagtgtgatcaccaataaaccaggccgccggagaacagactcc
aactacagcagcaatgagtctgagggaactcccagctctgcagagggaaggcacagttcg
gtgaaaactcacagctcaacacgcagctcctcagggttcaccgagtccgagaccagatct
ctacgaggagacgacgcgccacaccaggacgcgccacaccaggacgcgtctcaccaggac
gcggttgccatgtcagtcctgttgaagctgcagaggagagtcactgagctggagcaggac
aaacagacactgcagagacacctggataagcgggacgaggcacaacaagaccaggtcaaa
aatgcagagaagcaaagaactgcagggagagctgagctggacctggaggctctgaaacgc
caggagctggagtcggagaacaagaggctgaagacaaacctggcggagctgcgtcagtct
ctagctacagtcgccaacaccaaccccggggctaagaccaaccccggggctaagaccaac
cccggggctaagaccaaccccggggctaagaccaaccccggggctaagacctccaccagc
agccccgggccgggcaccgctccctacaacgtgctcctggagcagctcaactcctccaac
gaggagctggaggtcaggaaggaggaggtgctgctcctccgctcacacatggtccgccag
gaggtgctcaaacacaacaaggaagcgtatggagagatgcataagatgattcatcttggt
gaaaccaaagaggctgatggatccactcctgattaccacaagttgaacgaggatggagag
ctgtggctggcttatgacgggttgaaggagaccaacagcctgttggtgtctcagctgcag
gttcaggacaggaggcatgaggaggaggtggaggagctgagagaggaggtgctcagagtg
agagaggagaacaggcagcagcaacagttcctctcccagagcctcctcctcccccaggag
gctcgcatcgaggccagcctgcaccacgagatcacacgccttaccagcggcaacctggac
ctgatggagcagcaagagaaacaggacaagatgatccgcaaacttaagaaacagctcaaa
gtctacgtgaagagggtagaggaatacgaagctggcggtcagatggagagcgtgggtcca
gagcctcgctctcctgttggtatcacccggaaggagagggacttccaaggcatgctggag
taccggaggggggatgagagcaaactactgaagagtctggttgtggagctgaaacctcgc
ggtgtggcggttaacttcctccctggtctgccggcctacatcctgttcatgtgtctaaga
catgctgactactctaatgatgaccagagagtcagcgtcctgctcaactctaccatcaac
agcatcaagggagtcatcaagaggcgaggagatgactttgagacggtgtctttctggctg
gccaacacctgccggttcctacactgcctgaagcagtacagtggagaggaggcgtttata
aagaacaacaccccgcgtcagaatgagcactgcttgtgtaactttgacctgtcagagtac
cgtcaggtcctcagcgatctggccattcagaactaccagcagctggtcagatgcatggag
gaggccctgcagcccatgatagttccgggtatgctggagcatgagaacttccagggagtt
ctcccagggaggaggggggaggaggcagcagttgtagttggtctcttccacgctaccctg
attcagcatgacgtcgatcccgagctcatcaaacagggggtgaggcagcagttctacatc
atctgttctgtcactctcaacaacctgctgctgaggaaggacatgtgctcctggagtaaa
ggactgcagatcaggtataatgtgtggcagctggaggagtggctggaggagaaggggctg
acagactgtggagctaaagagatgctggagccgctgatccaggccgctcagttactacag
gtcaagaagaagactgaggaagacgcccaggctctctgcaccatgtgctctgccctcacc
actctacagattgtgaaagtgctcaccttgtacaccccagtgattgaatttgaggaacgg
gtttcgatatccttcattagaaccatacaggccctgttgaaaggccgtgttgagtcaccg
ctgctacttatggacaccaagaagatattctctgtgacatttcccttcacccactcccct
ctggctttggagaccattcagatccctagcagtctgaatctaggattcctcacacgggtc
taa
DBGET
integrated database retrieval system
