Oncorhynchus keta (chum salmon): 118380858 Help Entry 118380858         CDS       T09424                                  Name (RefSeq) cysteine protease ATG4B-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04136   Autophagy - other oke04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     118380858    04136 Autophagy - other     118380858  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:oke01002]     118380858   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118380858    03029 Mitochondrial biogenesis [BR:oke03029]     118380858 Peptidases and inhibitors [BR:oke01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    118380858 Membrane trafficking [BR:oke04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     118380858 Mitochondrial biogenesis [BR:oke03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     118380858 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  118380858 NCBI-ProteinID:  XP_052322651 LinkDB All DBs Position 1:93860298..93889777 Genome browser AA seq 393 aa AA seqDB search MDAATLTYDTLGFGEFDDFPETSEPVWILGKEFNALTEKEDILSDVTSRLWFTYRKNFPP IGGTGPTSDTGWGCMLRCGQMILGEALVRRHLGRDWRWGRSQSQREDYIGILNAFLDKKD GYYSLHQIAQMGVGEGKAIGQWYGPNTVAQVLKKLAVFDSWSRLAVHVAMDNTVVIEEIK RLCMPWLDYGGAACVDLSERNGCLEGACALAEDETALWNPLLLLIPLRLGLSDINEAYIE TLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDDTYHC QHPPCRMHICEIDPSIAVGFFCRTEDDFDDWCLRFRKLSHTRAGLPMFELIDWQPSHFAC SVDVLNLNPDFSDSDRLERFFDSEDEEFEILSL NT seq 1182 nt NT seq  +upstreamnt  +downstreamnt atggatgcagctactctcacatacgacacacttggctttggagagtttgacgattttcca gagacctcagagccagtgtggatcttggggaaagaattcaatgcactcacagaaaaggaa gacattctttcagatgtcacttcacgactatggttcacctacagaaaaaacttcccgccc attggagggacagggcctacgtccgacacaggctggggctgcatgctgcgatgtggacag atgatcctaggcgaggccctggtccgcaggcatctaggccgagactggagatgggggagg agccagtctcagagagaagactacatcggtatcctcaacgccttccttgacaagaaagac ggctactattctttgcatcaaatcgcccagatgggagtcggggaggggaaggctataggc cagtggtacggacccaacacagtggcacaggtactgaagaaactagctgtgtttgactcg tggagtcgcctggctgtacacgttgctatggacaacactgtggtgatcgaagagatcaag cggttgtgtatgccctggctggactatggtggagcagcgtgtgtggatctgtcagagcgt aacggctgcctggagggggcctgcgccctggctgaggacgagaccgctctctggaacccc ctgctcctcctcattcctctcaggctgggcctaagcgatatcaacgaggcctacatcgag accctgaagcagtgctttcagctgccccagtccctgggtgtcatcggagggaaacccaac agtgcccattacttcataggctatgttggagaagagttgatctacctggacccccacacc acccagcctgcagtagagccctgtgaggacagccaggtcccagacgacacttaccactgt cagcacccgccgtgccgcatgcacatctgtgaaatagacccctccatcgcagtgggtttc ttctgcagaacggaggacgacttcgatgactggtgtctgcgcttccgaaagttgtcccac actagagcaggcctgcccatgtttgaactgatagactggcaaccatctcacttcgcctgt tctgtagatgtactcaacctcaaccctgatttctcagactctgataggttggagcggttc tttgattctgaggatgaagagtttgaaattctgtccctgtga

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