KEGG   Oncorhynchus keta (chum salmon): 118380932
Entry
118380932         CDS       T09424                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118380932 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118380932 (exosc5)
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118380932 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 118380932
NCBI-ProteinID: XP_052326678
LinkDB
Position
1:5585682..5591809
AA seq 241 aa
MTTEISYVKSPRQTSSFLFTSTMDVCASPSPTLREFGCEQNLLSRPDGSSSFVQGDTSVL
AGVYGPAEVKVSKEIYDRATLEVVMQPKVGLPGVRERAREQCVRETCEASLLSTLHPRSS
LTLVLQVVHDDGSLLSCFLNSACMALIDAGLPMSCLFAGVTCAIDTDGQVITDPNAAQEK
ESRALMTFAIDSTERRVMMSSTRGSFTVHELQQCIAVSQKASDKIFQFYRDSVRRRYSKT
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacaacagaaataagctacgtcaaatccccgcgacagacttctagttttctttttaca
agcacgatggatgtgtgcgcgtctccgagtcctactttgagggagtttggctgcgaacag
aatttactatcacgacctgatggatcgtcgtccttcgtccaaggagacaccagtgtatta
gctggagtgtatggcccggcggaggtgaaggtcagtaaggagatctatgacagagctacc
ctggaggtggtgatgcagcccaaagtgggactaccaggtgtcagagagcgagccagagaa
cagtgtgtgagggaaacatgcgaggcgtctcttctctccacccttcatccacgctcctcc
ctcactctcgtcctacaagtggtccatgatgacggctcactgttgtcctgctttctgaac
tcagcctgtatggccctgattgacgcaggcctgcctatgagctgtctgttcgctggggtc
acctgtgccatcgatacagatggccaggtcattaccgaccccaatgcagcacaggagaag
gaaagtcgagctttgatgaccttcgctattgacagtaccgagcgcagagtgatgatgtca
tccaccagagggtcttttacagttcatgagctgcaacagtgtatcgctgtcagtcagaaa
gcatcggacaagatcttccagttctacagagattctgtcagacgaagatattccaagaca
ctctga

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