Oncorhynchus keta (chum salmon): 118380950
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Entry
118380950 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118380950
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118380950
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118380950
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118380950
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118380950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
7tm_3
MAP17
DUF6377
EphA2_TM
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
118380950
NCBI-ProteinID:
XP_052369693
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MDLTDFYLLAALVACFWMDPSIAQELIYPIREELQENVLIGNIPKDLNVSHTNAATGASA
NLVYRLVSKAGDNPLLRVQSSTGEIFTTSNRIDRERLCPGPSFEENECSFEIEVVILPND
YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYQL
VNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVT
VTDVNDNRPVFKENQIDVHVPENSPIGTSVVQLQATDADVGANAEIKYMFGTQVSPATKR
LFALNGTTGLITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDFEGTKEYNFKIIASDSGKPSLNQTALVRVRLEDENDNSPIFSHPVIELAVMEN
NKRDLFLTTLSATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVTLSILSDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
TKGLFRIDPVTGNITLEEKPAISDIGLHRLVVNISDLGXPKSLHTLVLVFLYVNDTVGNA
TFIYDLIRRTMETPLDRNIGESSETYQSGDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHT
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GNVSLPAELEEPGHFDWNAAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKHHM
IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGSVHPSRQVKDFYWSIST
AYNCPVQQC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacagacttttacttgttggctgctcttgttgcctgtttttggatggaccct
tctatagcccaggaactgatctatcctattagagaggaactgcaggaaaacgttctcatt
ggaaacataccaaaggacctgaacgtctcccatacaaacgctgctaccggagctagcgct
aacctggtctacaggctggtgtctaaagccggcgacaaccctctgctcagagtgcagagc
agcacgggagagatatttaccacctccaatcgcatcgacagggagaggctctgtcccggc
ccctcgttcgaggagaacgaatgctccttcgagatcgaggtggtgattttacccaacgac
tacttcagattgataaagattaagatcgtggtcaaggacaccaacgacaacgctcccatg
ttcccgtctcctgtcatcaacatctccatcccggagaatacgctgatcaacagtcgtttc
gccatcccctccgccaccgaccccgacaccggccccaacagtgtacacaagtaccagctg
gtgaacgggcaaagcgccttcgggttggacatcgtagagacgcccgagggggagaagtgg
ccgcagctcatcgttcagcagaacctggacagggaacagaaggacacgtacgtcatgaag
atcaaggtggaggacggcggcacgccgcagaaatccagcaccgccatcctccaagtcacc
gtcacagacgttaacgataacaggccggtgtttaaggagaaccagatcgacgtccacgta
ccggagaactcgcccatagggacgtccgtagtccagctacaggctacggacgcagacgtg
ggggcgaatgccgaaatcaaatacatgttcgggacgcaggtctccccagctaccaagaga
ctatttgctttaaacggcaccacgggtcttataaccgtacagcgacccctcgatagagag
gagaccgccatacacaagttatccgtgttagcgagcgacggcagctccagcccagccaga
gctaccgtaactataaacgtgacggacgtgaacgacaatccgccaaacatcgatctgaga
tatattatcagtccgataaacggcaccgtgttcctctcggagaaagacccaatcaacacc
aagatagctttgatcaccgtgtcggacaaggacacggacgtcaacggcaaggtcatctgt
ttcatcgagaaggacgtcccctttcacctcaaagcggtgtacgacaaccagtatttacta
gagacgtcagcgctgctcgacttcgaggggaccaaagagtacaacttcaaaatcatagcc
tccgactctggcaagccgagcttgaaccagacagcgttggtaagggtgaggctggaggat
gaaaatgacaactctccgatcttcagccatcctgtcatcgagctggccgtcatggagaac
aacaaacgcgatctcttcctcacgactctcagcgccaccgacgaggacagcgggagaaac
gcggagatcgtctaccaactgggccctaacgcctcgttctttgacctggaccgtaaaacc
ggtgtcctcacggcctcccgggtgtttgatcgcgaggaccaggatcggttcctcttcacg
gtaacggcccgagacaatgggacgcctccactccagagccaggcagcagtcatcgtgaca
gtactcgatgaaaatgacaatagccccaagttcacccacaaccacttccagttctttgtg
tcagagaacctgcccaagtacagcacggtgggggtgataactgtcacagactcagacgcc
ggggaaaatgctgccgtcacgctttcgatactcagcgacaacgagaactttatcctagac
ccgtactctggagtaataaagtccaacgtgtcctttgaccgggagcagcagagctcctac
accttcgacgtccgggcggtggatagcgggcggcccccatgttcctcggccgccaaggtg
accatcaatgtcatcgacgtaaacgacaacacccccatcgtcatctaccctccttccaac
acctccttcaaactggtccccctctcgtccatccctggatcggtggtggccgaggtcttt
gctgtggacggtgacacagggatgaacgcagagctcaagtacaccatcgttagcggcaac
accaaaggtctgttccggatcgacccggtgacaggaaacatcaccctggaggagaagcct
gctatctccgacatcggcctccatcggctggtcgtgaacattagcgacctgggcntacct
aagtccctgcacaccctggtgctggtgttcctctacgtgaacgacacggtcggcaacgcc
acgtttatctacgacctcattcgccgcaccatggagacgcccctggacaggaacatcggg
gagagcagtgagacttaccagagcggtgattatctcaccatcatgatcgccatcgtagcc
ggggcgatggtggtgattgtggtgatcttcgtgacagtcctggtgcgctgccgtcacacc
tcccggttcaaggcggcccagagaaagaagcagggcgctgagtggatgtctcccaaccag
gagaacaagcagaacaagaagaagaagcgtaagaaaaggaagtcgcctaaaagctccctc
ctgaactttgtcaccatcgaggagaacaagccggacgacccggctcacgagcccatcaac
ggcaacgtcagcctgcctgccgagctggaggagcctggccactttgactggaacgctgct
ccaacgaccaccttcaagccctcgagtccagacctggcacggcactacaagtccgcttct
ccgcagtccgcgttccacctcaaagcggacacgccggtctccgtgaagaaacaccacatg
attcaggagctccctctggacaacaccttcgtagggggctgtgacactctgtccaagaga
tcctccactagttcagaccacttcagtgcctcggagtgcagttcccagggaggattcaag
actaagggatccgtacacccgtccagacaggtaaaagacttttactggtctataagtact
gcgtataactgcccggtccaacagtgctga
DBGET
integrated database retrieval system
