Oncorhynchus keta (chum salmon): 118381007
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Entry
118381007 CDS
T09424
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118381007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118381007
03036 Chromosome and associated proteins [BR:
oke03036
]
118381007
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118381007
Coactivators
SAGA/TFTC/STAGA complex
118381007
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118381007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
118381007
NCBI-ProteinID:
XP_052364611
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MASTSDPLEDMLFSEVDEKAVNDLVGSLESQLVGQSSPAHTQSENRGAGSTCTANHHLGK
TLPAQVGTTLVQQQQGQHKAGMHQEINSKEISLEKTVTSSSLSSIPSFEEASTTSGTGVN
ATKSGLQSHGTSSITTLPAFGGVATSPLVNSINSTTTSRGSALASGQTSTDIVDHPRKRI
TASLRSASAGIQSLNGTRGALTSRNNPPAAGTAALISSASAANSSRTVDVTSCVNTTNFT
LSNSRISSTQSAIPLDKGTPTIALQRLPSHIVASIAHNGNGTTVSALVKQGAIGPITSAA
ASQVNHKKEGSEAKSDAPVQSKIVMSSPLGVVNSVINSVSSPSAVSNIAAATTASHVIAK
PAVNVVGQTTTVGMVRSPAVTTATQPLLRPGVPAAQRTVAPQLIVRPPQQPQTTIQLPPG
FTIPPGMVLVRTEMGQLVMVPQQALAQAQAQAQAQAQAQAQNNISPRTATPTAGATFRAT
TLQKGPMAPAVAVTAPQQTPVVMAPQVQAGAQAQPALPPQTSVPVAPGASVISQEMQENV
KKCKNFLATLIKLASHNSPSPETSKNVKSLVQDLLDAKIEPEEFTNRLQSELKSSPQPYL
VPFLKKSLPALRLSLLNIQHSLIQPLPQAKATPTPTTGTSSAIMAVPAVRCRLPNSVSTT
GASVGAQGHTAALGIKQAGTAGCQVRMPMSITPLRTQGTVSKGAMFQAGKSPVGFAVKGF
GNQKNKQNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTHIRSCKDEAFL
HPGLLHRRILETAKKFGVSEVPMEAVNFISHATQSRLRTVLEKVSSIAQHRMDGGKDEEW
FEQSAGVRSQLKFFEQLERIEKQRKDEQERDPTQSS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacctccgacccactggaagatatgttattttctgaggtggatgaaaaagct
gtgaacgatttagtgggctctttggagtcacaacttgttggacaaagcagccctgcacat
actcagtcggaaaacagaggtgctgggtctacatgcactgcaaaccatcacttagggaaa
acgctaccagcccaagtgggtactacactagtacagcagcaacaaggacaacataaagct
gggatgcaccaggagataaactctaaagaaattagcttagagaaaactgtcacatcttct
tcgctgagttctattccgtcctttgaggaagcttccaccacttcagggactggagtaaac
gctaccaagagcggtttgcaatcacatggaacatcatctatcacaacactacctgcattt
ggtggtgtagcaacttctccgcttgtcaacagcatcaacagcactaccaccagccgaggt
tccgctctggcttcaggtcagacatcaacagacattgtcgatcatccaagaaaacgtata
actgcatcgttacggagtgcatccgcgggaatacagagtttgaacggtaccagaggagcg
ctaacgtcaaggaataatccccctgcggcgggaactgctgcgttgattagcagtgcaagt
gcagcaaactcaagtcggaccgttgacgttacatcttgtgtaaatacgacgaatttcact
ttgtctaactccagaatttcttcaactcaatcagcgattcccctggataaggggactcct
actattgctttgcaaagactaccaagtcacattgtagcgagcatcgcgcataatggaaat
ggcactaccgtctcggccttggttaaacagggcgcgataggaccgatcacttctgcagca
gcttcgcaagtgaaccacaaaaaagagggttctgaagcgaagtcggacgctcccgtacag
tccaaaatagtaatgtccagtccgttaggtgttgtcaattccgtaataaactctgtttcc
tctccctctgccgtttccaacatagcagcggcgactactgcaagtcatgtcatagcaaag
cctgctgtcaatgttgttggacaaacaacaactgttggaatggtaaggtcaccggctgtg
accacagctacacagcctctgcttcgaccgggagtcccagcagctcaaaggactgtagcc
ccccagctgattgtcagacccccccaacaaccacagacgaccattcaactgcctcctggg
tttaccatcccacccggaatggtgttagtgcgcactgagatgggtcagctggtgatggtc
ccacagcaggcccttgcccaggcacaggcccaagcccaggcccaggcccaggcccaggcc
cagaacaacatctccccccgaactgccacccccactgcaggggccaccttcagagcaact
accctacagaagggccccatggcgccggctgtggcagtgacggctccccaacagaccccc
gtggtaatggccccccaggtccaggctggggcccaggctcagccagccctgcccccacag
accagcgtccctgtagccccaggagcctctgtcatctcccaggagatgcaggagaatgtg
aagaagtgtaagaacttcttggccaccctgataaagctggcttcccacaactctccgtcg
cctgagacctccaaaaacgtcaagtcactggtccaggatctgctggatgctaagattgag
cctgaggagttcaccaacagactgcagtcagagctcaagtcgtctcctcagccctacctg
gtccccttcctcaagaaaagcctcccggccctgcggctgtctctgctcaacattcagcat
tccctgatccagcctctgccgcaggccaaagccacccccacccccaccacaggcaccagc
tctgccatcatggccgtcccagctgtccgctgccgcctccccaacagcgtcagcaccacg
ggggccagtgtcggggcccagggacacacagctgccctgggtatcaagcaagcaggcacc
gctggttgccaggtcaggatgcccatgtcgatcacaccattaagaacacaaggcactgtc
agcaagggagccatgttccaagcaggcaaaagtcctgtgggttttgctgttaagggcttt
ggaaatcagaaaaacaagcagaacgatcccggaggcggttctttcagggatgatgatgac
attaacgatgtggcgtccatggcgggggtgaacctgaatgaagagagcgctcgtatcctg
gcaaccaactctgagctggtggggacacacatccgctcctgtaaagatgaggccttcctt
cacccgggcctgttacacagacgcatcctggagacagctaagaagtttggcgtgtcagag
gttcctatggaggctgtgaacttcatctcccacgctacccagtcccgactccgcactgtg
ctggagaaggtctcctccatcgcacagcacaggatggacggtggtaaagatgaggagtgg
tttgagcagtcggcaggcgtgcggtcgcaactaaagttctttgagcagctggagaggata
gagaagcagaggaaggatgaacaggagagagatcctactcaaagcagctaa
DBGET
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