Oncorhynchus keta (chum salmon): 118381108
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Entry
118381108 CDS
T09424
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein isoform X1
KO
K13376
transforming growth factor beta-2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04060
Cytokine-cytokine receptor interaction
oke04068
FoxO signaling pathway
oke04110
Cell cycle
oke04218
Cellular senescence
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118381108 (tgfb5)
04350 TGF-beta signaling pathway
118381108 (tgfb5)
04068 FoxO signaling pathway
118381108 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
118381108 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118381108 (tgfb5)
04218 Cellular senescence
118381108 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oke04052
]
118381108 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118381108 (tgfb5)
Cytokines and neuropeptides [BR:
oke04052
]
Cytokines
Transforming growth factors (RSTK binding)
118381108 (tgfb5)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Growth factors/receptors
118381108 (tgfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
118381108
NCBI-ProteinID:
XP_035623972
EnsemblRapid:
ENSOKEG00005003685
LinkDB
All DBs
Position
4:69214814..69221889
Genome browser
AA seq
430 aa
AA seq
DB search
MEPSESVHQSDHRTMWLTHLALLLLRLAVSAEGLSTCQSFSLDDQKSKRIEAVRGQILSK
LRYRSPPEPPAPSPQPETVPAEVMLLYNSTRELLKERARQAESACDRESSEEDYYAKEVQ
RIDMLPQRTDINAVNPPAPSPYYRVVGFDVSGVDRNSSTLVKAEFRIYRAANPQARTSEQ
RVEIYQVIEPEEPTGPSQRYIDSRTVRPRTKGAWLSVDVTDTVKDWLAHKERNLGLKLGV
HCPCCTFVPSTNSIVFNKSEELETRFAGLDDELLQQQVRKPGAKGQVEFSTKTPHLILTL
LPSDRVDNPGKKTRKRRAAADTTTCSRNSGAGCCLRSLYIDFRRDLNWKWIHEPKGYKAN
FCSGSCPYLWSADNHYNMILPLYNKLNPEASASPCCVPQDLEPLTIVYFMGRTPKVEQLS
NMVVRSCKCR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagccgagtgagtccgttcaccaatctgaccaccggactatgtggctgacccacctc
gccttgctgctgctccggctggcggtgtccgcggaggggctctccacctgccagtcattc
agcctggatgatcagaagtccaagcgcatcgaggccgttcgcggtcagatcctcagcaag
ctccgctaccggagcccaccggagccccccgcaccgagcccacagcccgagactgtgccc
gctgaggtgatgctgctctacaacagcactcgggagctgctgaaggagcgtgcgcgccag
gccgagtccgcgtgcgaccgggagagcagcgaggaggattattatgcaaaagaggttcag
cgcatagacatgcttccgcagcgcacagacatcaatgcagtgaaccctccagcccccagc
ccatattacagagtggtgggattcgatgtgagtggtgtggacaggaactccagcaccctg
gtcaaagctgagttcagaatctacagagcagccaacccccaggcccgcacctcagagcag
agagtagagatctatcaggtgatagagccagaagagccaacaggcccctcgcagagatac
atcgattccagaactgttcgcccacggaccaagggggcgtggctctctgtggatgtcact
gacactgtgaaggactggctggctcataaggagaggaacttgggtttgaagctgggtgtt
cactgtccatgctgcaccttcgttccctccaccaacagcattgtgttcaataagagtgag
gagctggagacacgcttcgcaggtctggatgatgagctgcttcagcagcaggtgcggaag
ccgggggctaagggccaggtagagtttagtaccaagaccccccacctcatcctcaccctg
ctgcccagtgacagggtagacaacccgggcaaaaagacccgcaagaggagggctgctgca
gacaccaccacctgctccaggaattcaggcgcgggctgctgtctgcgatctctctacatc
gacttccgccgggacctgaactggaagtggatccacgagccgaagggctacaaggccaat
ttctgctctggcagctgcccatacctctggagcgctgacaaccactacaacatgatcctg
ccactgtataacaagctgaaccctgaggcgtcggcatctccgtgctgcgtacctcaggac
ctggagcctctgaccatcgtgtacttcatgggccgaacgcccaaggtagagcagctctcc
aacatggtggtcaggtcctgcaagtgccgctga
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