Oncorhynchus keta (chum salmon): 118381128 Help Entry 118381128         CDS       T09424                                  Name (RefSeq) protein Atg16l2 isoform X1   KO K20868   autophagy-related protein 16-2 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     118381128  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118381128    03029 Mitochondrial biogenesis [BR:oke03029]     118381128 Membrane trafficking [BR:oke04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     118381128  Others   Specific organelles associated proteins    Auto phagosome     118381128 Mitochondrial biogenesis [BR:oke03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     118381128 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta ATG16 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_VPS8 Beta-prop_NOL10_N CFAP251_N ANAPC4_WD40 Beta-prop_NWD2_C Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_ACSF4 PAC11 Beta-prop_WDR75_1st Ge1_WD40 Beta-prop_SPT8 Tuftelin_like FKBP15 Beta-prop_WDR35_TULP_N Cytochrom_D1 Motif Other DBs NCBI-GeneID:  118381128 NCBI-ProteinID:  XP_052331010 LinkDB All DBs Position 1:7011167..7079993 Genome browser AA seq 574 aa AA seqDB search MAALGAERGEASKVEEKINTQKTADSWKRHIIRQLKHRDKYQKAMFQDVILAYINLLERS NQRALITKGILGSGSRYPASSNDSLTSLISKNDDLKKTTGELAYQVLELQQEIKIKDSVL EEQHARMCEVRRDLLGVQAEDGSLAVRVAEVTEGNRLLKREYDSLLEQHHDMDQTFREEK LRGQEMLEELVRRKQHAAIRMNSRNERRVRAREASLQKELETAGKVKVTIDVGSVSAPAS REASPKSDLAERRTTRLFRSASVTSPPRILDSIKELFDRKKRRGNSLCLSLEEELYVPVG ICLAARVPVRALHVLDAHELGINAVRFSSSCNLLATGGTDRCIKLWDVKAGMLHNRGTLD GSNEGITSIEFDQTGTRVIAASYDKSALFWRLDDSAPKLTLTGHSRKVTAAKFKCSLRQV VTGSADRTVKIWDLHRAACIQTIEVLSYCSDVVCSEHVIVSGHYDRKIRFWDSRAASCTQ EVPLQGKVTSLDISTDHRQLLSCSRDESLQVVDLRMNSSRICFRAEGFKCGCDSTKAIFS PDGSYLAAGSADGAVYIWNVNSGNLETRLPDMHR NT seq 1725 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctaggagcggaacgtggcgaggcgtctaaagtcgaagaaaagataaacaca cagaagacggccgactcatggaaacgtcatatcatccgccaactcaaacatcgggataag tatcagaaggcgatgtttcaagatgtcatactggcatatattaatctgctggagaggtcc aatcagagagccctcatcacgaaaggcatcctgggatctggttcaaggtaccctgcctcc tccaacgactccttgacgtctctgatttccaagaatgatgatctgaagaaaacaactggg gagctggcctaccaggtattggagctccagcaggagattaagatcaaagactccgtactg gaagagcaacatgccaggatgtgtgaggtgcggagggatctgctgggggtgcaggctgag gatggaagtctggcggtgcgtgttgccgaggtgacggaggggaaccggctgttgaaacgg gagtacgactccctgctggagcagcaccatgatatggaccagaccttcagagaggagaag ctcagaggtcaggaaatgctggaggagctggtccgcaggaagcagcacgcagccatcagg atgaacagccgcaacgagagacgggtcagagccagagaggcaagtcttcagaaggaactg gagaccgccgggaaggtgaaggtgaccattgacgtcgggtcggtcagtgccccggcctcc agagaagcctcccctaagagtgatctggccgagagacggacaactagactgttcaggtca gcctcagtaacatcccctcccaggattctagattccatcaaagagctttttgatagaaag aagcgtcgggggaactcgctgtgtctgagtctggaggaggagctgtatgttcctgtaggg atctgtctggctgccagggtccctgttagggctctgcatgtcctggatgcccatgagttg ggcattaatgcagtgaggttcagctccagttgtaacctgcttgctactggagggacagac agatgcattaagctgtgggacgttaaagcaggcatgctccacaacagaggtacactagat ggcagcaacgaaggaataaccagcatagagtttgaccaaacaggcaccagggttatagca gcgtcatatgataaatcagctctgttctggcggctggatgactctgctcccaagctcact ctgacaggccactcacgtaaagtgacagcagccaagtttaaatgcagcctgcgccaggtg gtgacaggaagcgcagacaggaccgtcaagatctgggatctccaccgcgctgcttgtatc cagaccattgaggttctatcttactgcagtgatgtggtgtgttctgagcacgtcatcgtc agtggacactatgacaggaagatacgcttctgggacagcagggctgccagctgtacccag gaggttcctctccaggggaaggtaacatctctggacatctctactgaccaccgtcagctc ctcagctgctccagagacgagagtctgcaggtggtcgaccttcgcatgaacagctccagg atatgcttcagagctgagggcttcaaatgtggctgtgacagcaccaaggctatattcagt cctgatgggagctacctggcagcaggatcagcagatggggccgtttacatctggaacgtc aactctggcaacctggagacacgactaccggacatgcacaggtag

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